CB294021

Overview
NameCB294021
Unique NameCB294021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length324
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.867e-17
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = -2
Query:    9 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPER 323
            EW M E++  P I+ K   E+++ +GK   + ESD+  L Y++A  KE FRLHP  P  LP  +  D+   G+  P G+ VL++  GIGR+  + D P+ F PER
Sbjct:  336 EWGMAEMINEPSIMQKAVEEIDRVVGKDRLVIESDLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPER 440          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.867e-17
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNP-IGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM+EL+R P +L K + E+   +G   P +   D +++PYL+ V KET RLHP   LL+P +   D+   G+  P   +V VN W IGRD      P  F P+RF
Sbjct:  339 WAMSELMRKPQVLRKAQAEVRAAVGDDKPRVNSEDAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRF 444          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.438e-17
Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EWA+ EL+ +P+I +K+R EL   +G    + E D+ +LPYLQAV KET RL  A+PLL+P     D++  G+  P  +++LVN W +  + +    P  F PERF
Sbjct:  316 EWAIAELVNHPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERF 421          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.438e-17
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ NP+I  K+R EL+  +G    I E D+ +LPYLQAV KET R   A+PLL+P     D++ AG+  P  +++LVN W +  +    + P  F PERF
Sbjct:  317 EWGIAELVNNPEIQKKLRHELDTVLGAGVQICEPDVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERF 422          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.438e-17
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGA--GFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW M E++RNP + +++R E++  +G      + D++R+PYLQAV KET R HP  PLL   +      G   G   P G   +VN W I  DGE+  +P +F PERF
Sbjct:  360 EWCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERF 467          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.438e-17
Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            WAM E+L+NP + +K + ++ +         E+D+  L YL+ V KET RLH  VPLL+P +   ++E  G+  P   +V+VN W +GRD +  D+  SF PERF
Sbjct:  313 WAMAEMLKNPSVFAKAQAKVREAFRDKVTFDENDVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERF 417          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.438e-17
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = -2
Query:    6 WAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 320
            W MT L+ NP ++ K + E+ + I   + I E DI RL YL+ V KETFR+ P VPLL+P +A  D +  G+  P    + VN W I R+  +  +P +FIPERF
Sbjct:  308 WVMTYLISNPRVMKKAQAEVREVIKNKDDIIEEDIERLEYLKMVVKETFRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERF 412          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.184e-17
Identity = 43/107 (40.19%), Postives = 66/107 (61.68%), Query Frame = -2
Query:    3 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERFW 323
            EW + EL+ +P+I  K+R E+++ +G  + + E DI +LPYLQAV KET RL  A+PLL+P     D++  G+  P  +++LVN W +  +      P  F PERF+
Sbjct:  317 EWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFF 423          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.184e-17
Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            EW + EL+ +P+I  KVR E+++ +G  + + E D+ +LPYLQAV KET RL  A+PLL+P     D++  G+  P  +++LVN W +  +      P  F PERF
Sbjct:  316 EWGIAELVNHPEIQKKVRDEIDRVLGPGHQVTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERF 421          
BLAST of CB294021 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.184e-17
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = -2
Query:    6 EWAMTELLRNPDILSKVRLELEQPIGKCNPIGESDISRLPYLQAVFKETFRLHPAVPLLLPGKAPADSEGAGFKGPNGAQVLVNPWGIGRDGELRDNPYSFIPERF 323
            E++M+EL+ N  +L+K++ E+         + E D+SR+PYL+A  KE+ R+HP  P LLP  +  D E  G+  P G +V+VN W + RD    D    F PERF
Sbjct:  337 EYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERF 442          
The following BLAST results are available for this feature:
BLAST of CB294021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C79A2_ARATH1.867e-1740.00Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C71E1_SORBI1.867e-1740.574-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
TCMO_ZINEL2.438e-1741.51Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_PETCR2.438e-1742.45Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C78AB_ORYSJ2.438e-1740.74Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C71D7_SOLCH2.438e-1740.00Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BB_ARATH2.438e-1742.86Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN3.184e-1740.19Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_GLYEC3.184e-1740.57Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71C1_MAIZE3.184e-1739.62Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294021 ID=CB294021; Name=CB294021; organism=Citrus sinensis; type=EST; length=324bp
CCCCAAAACCTCTCTGGAATAAAAGAGTATGGGTTGTCCCTTAATTCACC
ATCCCTTCCTATACCCCATGGGTTGACTAAAACTTGGGCCCCATTTGGCC
CCTTGAACCCGGCACCTTCTGAATCTGCTGGGGCTTTACCGGGAAGTAAA
AGAGGAACTGCCGGGTGCAACCGGAAGGTTTCTTTGAATACTGCTTGTAA
ATAAGGCAAGCGGCTGATGTCTGATTCCCCAATTGGATTGCATTTCCCAA
TCGGTTGTTCCAACTCTAATCGGACTTTTGATAAAATATCTGGGTTGCGA
AGTAGTTCTGTCATTGCCCATTCC
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