CB294024

Overview
NameCB294024
Unique NameCB294024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:818..1638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB294024 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = -2
Query:  251 VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKV-EANGNDFRYLPFGVGRRSC 679
            +A  +TT  S+ +    L  HPEIQKKL+ E+D    P  ++T     KL YL+ V+KE LRL     L+     L    + G ++ A + I V+ W L ++P  W                ++  A G    YLPFG+G R C
Sbjct:  325 LAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDREC-PDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESGDELFFAKGG---YLPFGMGPRIC 464          
The following BLAST results are available for this feature:
BLAST of CB294024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
C13A7_CAEEL8.444e-1132.64Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB294024 ID=CB294024; Name=CB294024; organism=Citrus sinensis; type=EST; length=821bp
TGAACCGACTTAGAAAAAACCATTCAACCACTATGAAACAGTCTTAACAT
TACAACCAAATGGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAAT
GGTCCAGTGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAG
TGTCAATCTTAGATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACC
AAACGCCCAATAGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGG
GCAGCTTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCAT
TAGCCTCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCT
TCAGGTTTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCAC
TAGGATTTTGCTCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGT
GAAGGTTCATGTGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGA
GTTTCCTTGATCACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTC
AGTGATTTGATGACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCT
TCTTCTGGATTTCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATC
GACCAAAGAGTTGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTA
TAGAACGTTGTCCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATAT
GATCGATTGCGCATTTCAAGCTTTCATTACTCATGCTCTTCGTGCTTGCC
AATTTCTTTCTCTCCTCAACA
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