CB304394
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = -3 Query: 264 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAG 584 E+IE+MVQEAEKYK EDD + KV +KN+LE+YA+NM++T++DEK+ K+ DK KI + E I WLD NQ AE +E+E KELE +CNPII K+YQG G G Sbjct: 513 EDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPG 619
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 56/107 (52.34%), Postives = 83/107 (77.57%), Query Frame = -3 Query: 264 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAG 584 EEIE+MV +AEK+K ED++ + +V AKN LE+YA++M++T++DEK+ K+ +D+++I + EE ++WLDGNQ AE +E+E + KELE +CNPIIAKMYQ G G Sbjct: 515 EEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQEAGGVGG 621
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = -3 Query: 279 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGG 584 EEIE+MV +AEKYKAED+ ++K+ AKNALE+YA+NM++ + DE + K+ +DKKKI E + WL+ NQLAE DEF+ K KELE +CNPII K+YQGG Sbjct: 515 EEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLQGKISESDKKKILSKCNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQGG 616
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.262e-29 Identity = 59/102 (57.84%), Postives = 79/102 (77.45%), Query Frame = -3 Query: 279 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGG 584 EEIE+MVQEAE+YKAED+ ++K+ AKNALE+YA+NM++ + DE + K+ +DKKKI D E + WL+ NQLAE +EF+ K KELE +CNPII K+YQ G Sbjct: 515 EEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCSEVLSWLEANQLAEKEEFDHKRKELENMCNPIITKLYQSG 616
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 1.649e-29 Identity = 60/110 (54.55%), Postives = 84/110 (76.36%), Query Frame = -3 Query: 258 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQ-GGGADAGAS 584 ++IE+MV EAEKYKA+D+ K ++ AKN LE+YA+N++ TI+DEK+ K+ DKKKIED +E ++WLD NQ AE +EFE + K+LE + NPII+K+YQ GGA GA+ Sbjct: 514 DDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAPPGAA 623
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.649e-29 Identity = 54/112 (48.21%), Postives = 84/112 (75.00%), Query Frame = -3 Query: 249 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAGASMDE 584 E+IE+MVQ+A+KYKAEDD ++K+ AKN+LE+YA+NM+++++D+ + K+ DKKK+ D ++ I WL+ NQL + +E+E ++KELE +C PII K+YQ GG G D+ Sbjct: 515 EDIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPIITKLYQQGGMPTGCCGDQ 626
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.153e-29 Identity = 58/108 (53.70%), Postives = 81/108 (75.00%), Query Frame = -3 Query: 261 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGADAGA 584 EEI++MV EAEKYKAED+ +++AKN LE+YAY++RN++ D + K+ +DK+ I+ A++E I+WLD N A DE+EDK KELE + NPI+AK+YQ GGA GA Sbjct: 511 EEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQAGGAPGGA 618
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.153e-29 Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = -3 Query: 279 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGG 584 EEIE+MV +AEKYKAED+ ++K+ AKNALE+YA+NM++ + DE + K+ +DK KI D E + WL+ NQLAE DEF+ K KELE +CNPII K+YQGG Sbjct: 515 EEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKNKILDKCNELLSWLEVNQLAEKDEFDHKRKELEQMCNPIITKLYQGG 616
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 2.812e-29 Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = -3 Query: 273 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGA 584 EEIE+MVQEAE+YKAED+ + +V AKNALE+YA+NM++ ++DE + KL ADKKK+ D +E I WLD N LA+ +EF K +ELE +C+PII+ +YQG GA Sbjct: 513 EEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGAGA 616
BLAST of CB304394 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.812e-29 Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = -3 Query: 273 EEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELECICNPIIAKMYQGGGA 584 EEIE+MVQEAE+YKAED+ + +V AKNALE+YA+NM++ ++DE + KL ADKKK+ D +E I WLD N LA+ +EF K +ELE +C+PII+ +YQG GA Sbjct: 513 EEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGAGA 616 The following BLAST results are available for this feature:
BLAST of CB304394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304394 ID=CB304394; Name=CB304394; organism=Citrus sinensis; type=EST; length=586bpback to top |