CB304514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_CANAL (60S ribosomal protein L10a OS=Candida albicans GN=RPL10A PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.082e-34 Identity = 72/111 (64.86%), Postives = 88/111 (79.28%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y+AF+ASE +IKQIPRLLG L+KAG+FPT V+H L SKV + K+T+KFQLKKVLC+ VAVGN+ MEE + + M+ NFLVSLLKKNWQNV L +KSTMGPS RI+ Sbjct: 107 YNAFIASEVLIKQIPRLLGRTLSKAGQFPTPVSHNDDLYSKVTDVKSTIKFQLKKVLCLAVAVGNVDMEEDVLVNQIMMAANFLVSLLKKNWQNVGSLVIKSTMGPSFRIY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL1_YEAST (60S ribosomal protein L1 OS=Saccharomyces cerevisiae GN=RPL1A PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.148e-34 Identity = 69/111 (62.16%), Postives = 88/111 (79.28%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT V+H L KV + ++T+KFQLKKVLC+ VAVGN+ MEE + + MSVNF VSLLKKNWQNV L +KS+MGP+ R++ Sbjct: 107 YNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL1A_SCHPO (60S ribosomal protein L1-A OS=Schizosaccharomyces pombe GN=rpl1a PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.112e-34 Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ V+H L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+ N+ +++NFLVSLLKK WQN+ L +KSTMG R++ Sbjct: 106 YDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHSDDLYGKIIEVKSTIKFQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKGWQNIGSLVIKSTMGKPYRLY 216
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_TRYBR (60S ribosomal protein L10a OS=Trypanosoma brucei rhodesiense GN=RPL10A PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.160e-34 Identity = 67/111 (60.36%), Postives = 87/111 (78.38%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFL SES+IK +PRL+GP +++ GKFPT+ +SL KV E ++TVKFQLKKVLC+G VG++ M E Q+ QNV M++NFLVSLLKKNWQN++ Y+KSTMG S RI+ Sbjct: 104 YDAFLCSESIIKTVPRLVGPHMHRVGKFPTVCAQNESLPDKVLELQSTVKFQLKKVLCLGTCVGHVDMTEDQVRQNVVMAINFLVSLLKKNWQNLKSAYIKSTMGKSQRIY 214
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_PIG (60S ribosomal protein L10a (Fragment) OS=Sus scrofa GN=RPL10A PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 9.203e-18 Identity = 41/59 (69.49%), Postives = 52/59 (88.14%), Query Frame = -2 Query: 367 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCM 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH + +KV+E K+ VKFQ+K+VLC+ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNXDMVAKVDEVKSRVKFQMKEVLCL 165
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_CAERE (60S ribosomal protein L10a (Fragment) OS=Caenorhabditis remanei GN=rpl-10a PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.497e-17 Identity = 41/55 (74.55%), Postives = 51/55 (92.73%), Query Frame = -2 Query: 379 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKK 543 Y AF+ASES+IKQIPR+LGPGLNKAGKFP++VTH +SL+SK +E +ATVKFQ+KK Sbjct: 58 YDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKK 112
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_ENTHI (60S ribosomal protein L10a (Fragment) OS=Entamoeba histolytica GN=RPL10A PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = -2 Query: 346 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNL 543 Y+ FL S+SV +Q+ ++LGPGLNK GKFP + + L+ K+NE + V QLKKVLCMGV GN+ Sbjct: 100 YNTFLGSDSVGRQLQKILGPGLNKGGKFPPPLGKNEDLKVKINELQCQVNSQLKKVLCMGVGGGNV 165
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL1_METB6 (50S ribosomal protein L1P OS=Methanoregula boonei (strain 6A8) GN=rpl1p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 35/110 (31.82%), Postives = 60/110 (54.55%), Query Frame = -2 Query: 214 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 543 Y FLA +V+ Q+ R LGP L G+ P + Q + V + +VK + K VG+ +M +Q+ +N+ + + S+L++ NVR +++K+TMGPS R+ Sbjct: 104 YKYFLAETAVMPQVGRFLGPRLGPRGRMPMPIPGQTDIRPIVERLRNSVKIRTKDKTVFSTKVGSTAMTPEQVSENIDAILKRVESVLEQGHLNVRSVFVKTTMGPSVRL 213 The following BLAST results are available for this feature:
BLAST of CB304514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304514 ID=CB304514; Name=CB304514; organism=Citrus sinensis; type=EST; length=604bpback to top |