CB304558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_HUMAN (40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.189e-17 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_BOVIN (40S ribosomal protein S3 OS=Bos taurus GN=RPS3 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.189e-17 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_ICTPU (40S ribosomal protein S3 OS=Ictalurus punctatus GN=rps3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.649e-17 Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = -3 Query: 268 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 429 PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PK+E Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_MANSE (40S ribosomal protein S3 OS=Manduca sexta GN=RpS3 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.525e-16 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = -3 Query: 247 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 429 P N+Y+++A RHVLLRQGVLGIKVKIML WD GK GP P PD + + PKDE ++PT Sbjct: 164 PCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPT 224
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_DROME (40S ribosomal protein S3 OS=Drosophila melanogaster GN=RpS3 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.899e-15 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = -3 Query: 220 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 429 P N+Y+++A RHVLLRQGVLGIKVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P Sbjct: 165 PCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 231
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_CAEEL (40S ribosomal protein S3 OS=Caenorhabditis elegans GN=rps-3 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.361e-13 Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = -3 Query: 220 PVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE----EEYVKPTLVATDIEVP 429 PVN+YI AVRHV LRQGV+GIKVKIML +DP G+ GP LPD V I P++E E + + D++VP Sbjct: 165 PVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQHKEEKKDVQVP 238
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_SCHPO (40S ribosomal protein S3 OS=Schizosaccharomyces pombe GN=rps3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.466e-12 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = -3 Query: 208 QPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQVA 432 QP ++IDSA RHVLLRQGVLG+KVKIML P K LPD+V + PK+EE KP V I P++ A Sbjct: 164 QPAVDFIDSATRHVLLRQGVLGVKVKIML---PEPKTRQKKSLPDIVVVLDPKEEEPITKPYTV---INQPVEAA 232
BLAST of CB304558 vs. ExPASy Swiss-Prot
Match: RS3_YEAST (40S ribosomal protein S3 OS=Saccharomyces cerevisiae GN=RPS3 PE=1 SV=5) HSP 1 Score: 68.9366 bits (167), Expect = 9.751e-12 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = -3 Query: 244 QPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 432 QPVN++ID+A RHVL+RQGVLGIKVKIM DP + LPD VTI PK+EE + P++ Sbjct: 162 QPVNDFIDTATRHVLMRQGVLGIKVKIMR--DPAKSRTGPKALPDAVTIIEPKEEEPILAPSV 222 The following BLAST results are available for this feature:
BLAST of CB304558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304558 ID=CB304558; Name=CB304558; organism=Citrus sinensis; type=EST; length=434bpback to top |