CB304641

Overview
NameCB304641
Unique NameCB304641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2940 contig Csv1_Contig2940:243..885. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304641 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11
Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = -1 
Query:  362 ELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYRLSQNPKARPLMSDVVETLEPLQCANDGGNEISS 643
            E++TG  + +  RP  ++SLVDW RP+L++K ++ QI+D  ++ QY+ + A +   +    +  +PK RP M +VVE LE +Q  N   N  S+
Sbjct:  287 EIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQGLNVVPNRSST 380
The following BLAST results are available for this feature:
BLAST of CB304641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CX32_ARATH2.478e-1136.17Probable serine/threonine-protein kinase Cx32, chl... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_G12 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_G12 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304641 ID=CB304641; Name=CB304641; organism=Citrus sinensis; type=EST; length=643bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTAACAGTGGCTTCGGATC
AACATGATATTTTGTGCATTAAGTACAAAGCAAAAGCACCCATGATTTAA
CAAGAAAATTTGGTCATTCTGAAACGGGTCATAAGACGAAAACCACACAC
CCCACGAGTATACATATTTAGGTGACGTTTCTCATCTAACCCTGCATGCT
GCAGGGCCACCTGGGGAACAATTTGGATTAGGAGAACGACAACTAGAACC
AGGACCAACATTGTTGCTGAACCTTGGACGTGTTCGGTAACCTGGGATTC
CTCCCATTGCAAAAGCATTTGTAGCACCACCAGCAGCAACAACGAGATTT
GCAGTCAATGATGATGAGATTTCATTACCACCATCGTTAGCACATTGTAG
GGGTTCCAATGTTTCAACTACATCACTCATTAGAGGCCTTGCTTTAGGAT
TCTGGCTTAAACGATAGTATGCCAAGCTACAAGCTTTCTGTGCTGCCCTC
ACTGAGTACTGATTTTCCAATCTAGGGTCAATTATTTGCAGCATTTTTCT
CTTGTCATTTAGTTTTGGCCTGGCCCAATCTACCAAGCTTTGCTCTTTGC
TAGGTCTTGTCTTGTCAACAGACTTCCTTCCAGTCAATAGCTC
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