CB304644

Overview
NameCB304644
Unique NameCB304644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length477
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THILA_XENLA (Acetyl-CoA acetyltransferase A, mitochondrial OS=Xenopus laevis GN=acat1-A PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.005e-33
Identity = 74/120 (61.67%), Postives = 90/120 (75.00%), Query Frame = -2
Query:   39 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 398
            +V I   ARTP+G F G+LSS+ ATKLGSIAI+ A++RA      V+EV+ GNVL A  GQAP+RQA LGAG+  S   TTINKVC+SGMK+VMLAAQS+  G   ++VAGGMESMSN P
Sbjct:   34 EVVIASAARTPIGSFQGTLSSLPATKLGSIAIKAAVERAGIPADEVKEVYMGNVLQAGQGQAPSRQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVAGGMESMSNVP 153          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIL_MACFA (Acetyl-CoA acetyltransferase, mitochondrial OS=Macaca fascicularis GN=ACAT1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.420e-33
Identity = 71/121 (58.68%), Postives = 90/121 (74.38%), Query Frame = -2
Query:   39 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401
            ++V IV   RTP+G FLGSLS +  TKLGSIA++ A+++A      V+E + GNVL    GQAPARQA LGAG+P S   TTINKVC+SGMKA+M+A+QS+  G  D++VAGGMESMSN P
Sbjct:   40 KEVVIVSATRTPIGSFLGSLSLLPTTKLGSIAMQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPARQAVLGAGLPISTPRTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVP 160          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIL_DANRE (Acetyl-CoA acetyltransferase, mitochondrial OS=Danio rerio GN=acat1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 7.620e-33
Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = -2
Query:   39 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 398
            +V IV   RTP+G F GSLS++ ATKLGSIAI+ A+ +A      V+EV+ GNVL A  GQAP RQA LGAG+P S   TTINKVC+SGMK++MLA+QS+  G  D++VAGGMESMS  P
Sbjct:   34 EVVIVSAVRTPIGSFKGSLSTLPATKLGSIAIKGAIDKAGIPVEEVKEVYMGNVLQAGEGQAPTRQALLGAGLPLSTPATTINKVCASGMKSIMLASQSLMCGHQDVMVAGGMESMSQVP 153          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIA_CANTR (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 1.300e-32
Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = -2
Query:   30 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRA-NAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 395
            V IV  ARTP+G F GSLSS++ + LG+ A++ AL +    KP  V E+ FG VL AN+GQAPARQ AL AG+P+S+V +TINKVC+SGMKAV++ AQ+I  G +DIVV GG ESMSN P YL
Sbjct:    6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQAPARQVALKAGLPDSIVASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTPYYL 128          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIB_CANTR (Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 1.698e-32
Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = -2
Query:   30 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRA-NAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 395
            V IV  ARTP+G F GSLSS++ + LG+ A++ AL +    KP  V E+ FG VL AN+GQAPARQ AL AG+P+S++ +TINKVC+SGMKAV++ AQ+I  G +DIVV GG ESMSN P YL
Sbjct:    6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQAPARQVALKAGLPDSIIASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTPYYL 128          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 4.939e-32
Identity = 71/127 (55.91%), Postives = 94/127 (74.02%), Query Frame = -2
Query:   30 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLL--VQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 404
            +++V IV  ARTP+G F GSLSS +A +LG++A++ AL +           E+ FGNVLSANLGQAPARQ AL AG+ N +V +T+NKVC+S MKA++L AQSI+ G  D+VVAGG ESM+NAP Y+
Sbjct:    2 SQNVYIVSTARTPIGSFQGSLSSKTAVELGAVALKGALAKVPELDASKDFDEIIFGNVLSANLGQAPARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTNAPYYM 128          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.100e-31
Identity = 72/127 (56.69%), Postives = 93/127 (73.23%), Query Frame = -2
Query:   30 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLL--VQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 404
            +++V IV  ARTP+G F GSLSS +A +LG+ A++ AL +           E+ FGNVLSANLGQAPARQ AL AG+ N +V TT+NKVC+S MKA++L AQSI+ G  D+VVAGG ESM+NAP Y+
Sbjct:    2 SQNVYIVSTARTPIGSFQGSLSSKTAVELGAAALKGALAKVPELDASKDFDEIIFGNVLSANLGQAPARQVALTAGLGNHIVATTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTNAPYYM 128          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.100e-31
Identity = 75/123 (60.98%), Postives = 86/123 (69.92%), Query Frame = -2
Query:   30 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 398
            +V IV   RTP+G F G+LSSVSA  LG+I I+ A+KRAN +  LV EV  GNVL A LGQ PARQAAL AGI   +   TINKVC SG+K+V L AQSI  G  DIVV GGME+MS AP  L
Sbjct:    3 NVVIVSAVRTPIGSFNGALSSVSAVDLGAIVIQEAIKRANIESALVNEVIMGNVLQAGLGQNPARQAALKAGIEKEIPSLTINKVCGSGLKSVALGAQSIISGDADIVVVGGMENMSQAPYLL 125          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIL_YARLI (Acetyl-CoA acetyltransferase OS=Yarrowia lipolytica GN=PAT1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.075e-30
Identity = 68/119 (57.14%), Postives = 83/119 (69.75%), Query Frame = -2
Query:   33 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 389
            IVG ARTP+G F G+L SVSA  LG  A + A++R+      + E  FG VL+AN GQAPARQ  +  G P SV  TTINKVCSSG+K V LAAQ+I+ G  +++VAGGMESMSN P Y
Sbjct:   13 IVGAARTPVGKFNGALKSVSAIDLGITAAKAAVQRSKVPADQIDEFLFGQVLTANSGQAPARQVVIKGGFPESVEATTINKVCSSGLKTVALAAQAIKAGDRNVIVAGGMESMSNTPYY 131          
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIL_RALEH (Acetyl-CoA acetyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.030e-29
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = -2
Query:   30 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 398
            DV IV  ART +G F GSL+ + A +LG++ I+ AL+RA  KP  V EV  G VL+A  GQ PARQAA+ AG+P  V   TINKVC SG+KAVMLAA +I  G  +IVVAGG E+MS AP  L
Sbjct:    3 DVVIVSAARTAVGKFGGSLAKIPAPELGAVVIKAALERAGVKPEQVSEVIMGQVLTAGSGQNPARQAAIKAGLPAMVPAMTINKVCGSGLKAVMLAANAIMAGDAEIVVAGGQENMSAAPHVL 125          
The following BLAST results are available for this feature:
BLAST of CB304644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
THILA_XENLA2.005e-3361.67Acetyl-CoA acetyltransferase A, mitochondrial OS=X... [more]
THIL_MACFA3.420e-3358.68Acetyl-CoA acetyltransferase, mitochondrial OS=Mac... [more]
THIL_DANRE7.620e-3360.00Acetyl-CoA acetyltransferase, mitochondrial OS=Dan... [more]
THIA_CANTR1.300e-3259.35Acetyl-CoA acetyltransferase IA OS=Candida tropica... [more]
THIB_CANTR1.698e-3258.54Acetyl-CoA acetyltransferase IB OS=Candida tropica... [more]
THIL_YEAST4.939e-3255.91Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIL_SACBA1.100e-3156.69Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]
ATOB_HAEIN1.100e-3160.98Acetyl-CoA acetyltransferase OS=Haemophilus influe... [more]
THIL_YARLI2.075e-3057.14Acetyl-CoA acetyltransferase OS=Yarrowia lipolytic... [more]
THIL_RALEH1.030e-2956.91Acetyl-CoA acetyltransferase OS=Ralstonia eutropha... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_H05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_H05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304644 ID=CB304644; Name=CB304644; organism=Citrus sinensis; type=EST; length=477bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAGATACTTGGGCGCATTGGA
CATGCTTTCCATGCCACCCGCAACAACAATATCATTGATACCCAATTGAA
TACTCTGTGCAGCAAGCATTACAGCTTTCATCCCAGATGAACAGACTTTG
TTAATAGTGGTGCATACGACAGAATTAGGAATCCCAGCACCTAAGGCGGC
CTGTCTAGCGGGAGCCTGTCCTAAATTGGCGCTAAGAACGTTCCCAAAGA
AAACTTCTTGCACAAGGAGTGGTTTCGCGTTGGCCCTCTTAAGAGCACAT
TCGATAGCAATGGAACCCAGCTTTGTAGCTGAAACAGACGAGAGCGAGCC
AAGAAAGCCTCCCATTGGTGTACGTGCAACACCCACAATACAAACATCTC
GTGCTTTGATAGATTCTGAAGGTTCTAAAGGCACCATGCTAAATAGTATC
TTCAAAGAATCTTTAACTTTAAACCCC
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