CB304644

Overview
NameCB304644
Unique NameCB304644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length477
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIL_CHRVO (Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.303e-24
Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = -2 
Query:   30 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 398
            +V IV   RT +G F G L+ + A +LG+  I+  L++   KP  V EV  G VL+A  GQ PARQA + AG+P +   TT+N VC SG++AV LAAQ+I  G  DIV+AGG ESMS +P  L
Sbjct:    2 EVAIVAAQRTAIGSFGGGLAKIPAPELGATVIKALLEKTGVKPEDVSEVILGQVLTAGSGQNPARQALIKAGLPVTTPATTLNVVCGSGLRAVHLAAQAILAGDADIVIAGGQESMSLSPHIL 124
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_STAAW (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MW2) GN=MW0330 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -2 
Query:   39 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 395
            V +    RTP+G F G+   V A  LG+  IE  +K     P  + EV  GNVL A  GQ PAR AA+  G+P +V   T+NKVC SG+K++ LA QSI  G NDIV+AGGME+MS +P
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSP 122
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_STAAS (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0330 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -2 
Query:   39 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 395
            V +    RTP+G F G+   V A  LG+  IE  +K     P  + EV  GNVL A  GQ PAR AA+  G+P +V   T+NKVC SG+K++ LA QSI  G NDIV+AGGME+MS +P
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSP 122
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_STAAR (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0351 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -2 
Query:   39 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 395
            V +    RTP+G F G+   V A  LG+  IE  +K     P  + EV  GNVL A  GQ PAR AA+  G+P +V   T+NKVC SG+K++ LA QSI  G NDIV+AGGME+MS +P
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEINEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSP 122
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_STAAN (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0342 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -2 
Query:   39 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 395
            V +    RTP+G F G+   V A  LG+  IE  +K     P  + EV  GNVL A  GQ PAR AA+  G+P +V   T+NKVC SG+K++ LA QSI  G NDIV+AGGME+MS +P
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSP 122
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_STAAM (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0354 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -2 
Query:   39 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 395
            V +    RTP+G F G+   V A  LG+  IE  +K     P  + EV  GNVL A  GQ PAR AA+  G+P +V   T+NKVC SG+K++ LA QSI  G NDIV+AGGME+MS +P
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSP 122
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_STAAC (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain COL) GN=SACOL0426 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -2 
Query:   39 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 395
            V +    RTP+G F G+   V A  LG+  IE  +K     P  + EV  GNVL A  GQ PAR AA+  G+P +V   T+NKVC SG+K++ LA QSI  G NDIV+AGGME+MS +P
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSP 122
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_STAA8 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00336 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -2 
Query:   39 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 395
            V +    RTP+G F G+   V A  LG+  IE  +K     P  + EV  GNVL A  GQ PAR AA+  G+P +V   T+NKVC SG+K++ LA QSI  G NDIV+AGGME+MS +P
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSP 122
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_STAA3 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0355 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = -2 
Query:   39 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 395
            V +    RTP+G F G+   V A  LG+  IE  +K     P  + EV  GNVL A  GQ PAR AA+  G+P +V   T+NKVC SG+K++ LA QSI  G NDIV+AGGME+MS +P
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSP 122
[Close]
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.902e-24
Identity = 61/121 (50.41%), Postives = 79/121 (65.29%), Query Frame = -2 
Query:   39 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401
            R+V I   ART +G F G+  SVSA +LG  A + A+KRAN  P ++ E   G VL+A LGQ  ARQ ALGAGIP      TIN VC SG+++V +A+Q I LG  DI++ GG E+MS +P
Sbjct:    2 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSP 122
The following BLAST results are available for this feature:
BLAST of CB304644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
THIL_CHRVO1.303e-2448.78Acetyl-CoA acetyltransferase OS=Chromobacterium vi... [more]
THLA_STAAW2.902e-2448.74Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAS2.902e-2448.74Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAR2.902e-2448.74Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAN2.902e-2448.74Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAM2.902e-2448.74Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAC2.902e-2448.74Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA82.902e-2448.74Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA32.902e-2448.74Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_CLOD62.902e-2450.41Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_H05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_H05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304644 ID=CB304644; Name=CB304644; organism=Citrus sinensis; type=EST; length=477bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAGATACTTGGGCGCATTGGA
CATGCTTTCCATGCCACCCGCAACAACAATATCATTGATACCCAATTGAA
TACTCTGTGCAGCAAGCATTACAGCTTTCATCCCAGATGAACAGACTTTG
TTAATAGTGGTGCATACGACAGAATTAGGAATCCCAGCACCTAAGGCGGC
CTGTCTAGCGGGAGCCTGTCCTAAATTGGCGCTAAGAACGTTCCCAAAGA
AAACTTCTTGCACAAGGAGTGGTTTCGCGTTGGCCCTCTTAAGAGCACAT
TCGATAGCAATGGAACCCAGCTTTGTAGCTGAAACAGACGAGAGCGAGCC
AAGAAAGCCTCCCATTGGTGTACGTGCAACACCCACAATACAAACATCTC
GTGCTTTGATAGATTCTGAAGGTTCTAAAGGCACCATGCTAAATAGTATC
TTCAAAGAATCTTTAACTTTAAACCCC
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