CB304644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.486e-15 Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = -2 Query: 45 IKARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 410 I DV +VG RTP+G G L S+ +L + AI +++ P L++EV G+ LS+ G AR L AG+P IN++C SG+++V L A+ I+ G +I +AGG ESM++ Sbjct: 2 ISHEDVVVVGALRTPIGRATRGKLRSLRNDELVTAAIRGIIEKTGIDPRLIEEVILGHCLSSMEGNVAARMGVLRAGVPVETPVMIINRLCGSGLESVGLIAEKIRSGRIEIGLAGGFESMTS 124
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.358e-15 Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 39 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANAKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 404 +R+V I RTP+G F GSLS+V A L ++ ++ ++R + EVF G A + AR A L AG+P SV T+N++C+SGM A+ A ++I G ++ +AGG+ESMS AP Sbjct: 2 SREVFICDAVRTPIGRFGGSLSAVRADDLAAVPLKALVERNPGVDWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAFRAIACGEMELAIAGGVESMSRAP 125
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLI (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.358e-15 Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = -2 Query: 39 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAI-ECALKRANAKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401 R+ I RTP+G + G+LSSV A L +I + E ++ + +V G A + AR A L AG+P SV TTIN++C SG+ A+ AA++I+ G D+++AGG+ESMS AP Sbjct: 2 REAFICDGIRTPIGRYGGALSSVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAP 124
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIM_PONAB (3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.222e-14 Identity = 45/122 (36.89%), Postives = 61/122 (50.00%), Query Frame = -2 Query: 39 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401 R V +V RTP G + G L +AT L A + AL P V V GNVL ++ AR L GIP TIN++C SG ++++ Q I + ++V+ GG ESMS AP Sbjct: 5 RGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAP 126
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: THIM_HUMAN (3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.222e-14 Identity = 45/122 (36.89%), Postives = 61/122 (50.00%), Query Frame = -2 Query: 39 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401 R V +V RTP G + G L +AT L A + AL P V V GNVL ++ AR L GIP TIN++C SG ++++ Q I + ++V+ GG ESMS AP Sbjct: 5 RGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAP 126
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.222e-14 Identity = 49/124 (39.52%), Postives = 75/124 (60.48%), Query Frame = -2 Query: 39 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANAKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 404 +R+V I RTP+G F GSL++V A L ++ ++ ++R + EV+ G A + AR A L AG+P+SV T+N++C+SGM AV A ++I G ++V+AGG+ESMS AP Sbjct: 2 SREVYICDAVRTPIGRFGGSLAAVRADDLAAVPVKALVERNPQVDWSQLDEVYLGCANQAGEDNRNVARMALLLAGLPDSVPGVTLNRLCASGMDAVGTAFRAIASGEAELVIAGGVESMSRAP 125
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.596e-14 Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = -2 Query: 39 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANAKPL-LVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401 RDV I RTP+G F G+L+ V A L ++ ++ ++ A V EVFFG A + AR A L AG+P S+ T+N++C+SGM A+ A ++I G ++ +AGG+ESMS AP Sbjct: 2 RDVFICDAIRTPIGRFGGALAGVRADDLAAVPLKALIEPNPAVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVESMSRAP 124
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.723e-14 Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = -2 Query: 39 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANAKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 389 IV RTP G + G L++V A LG+I I ++R + V +V +G A + R +AL AG+P V TT+N++C S + A+ +AA++I+ G +++AGG+ESMS AP Sbjct: 6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAP 124
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.723e-14 Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = -2 Query: 39 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAI-ECALKRANAKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401 R+ I RTP+G + G+LS V A L +I + E ++ + +V G A + AR A L AG+P SV TTIN++C SG+ A+ AA++I+ G D+++AGG+ESMS AP Sbjct: 2 REAFICDGIRTPIGRYGGALSGVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAP 124
BLAST of CB304644 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.723e-14 Identity = 47/123 (38.21%), Postives = 68/123 (55.28%), Query Frame = -2 Query: 39 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANAKPLLVQEVFFGNVL-SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 401 ++ IV ARTP+G GSL++V LG+I ++ LKRA + ++ G A G AR AG+P +V T+N+ CSSG++++ AA+ I LG D +AGG ESMS P Sbjct: 2 KEAVIVSGARTPVGKAKKGSLATVRPDDLGAICVKETLKRAGGYEGNIDDLIIGCATPEAEQGLNMARNIGALAGLPYTVPAITVNRYCSSGLQSIAYAAEKIMLGAYDTAIAGGAESMSQVP 124 The following BLAST results are available for this feature:
BLAST of CB304644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304644 ID=CB304644; Name=CB304644; organism=Citrus sinensis; type=EST; length=477bpback to top |