CB304657

Overview
NameCB304657
Unique NameCB304657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2673 contig Csv1_Contig2673:872..1451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM2_SOYBN (Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.247e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSJ (Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CAM2 PE=2 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 1.247e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSI (Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.247e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.247e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.247e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.247e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.247e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM_CAPAN (Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 2.778e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM5_SOLTU (Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 2.778e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
[Close]
BLAST of CB304657 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.778e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = -2 
Query:  389 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 580
            LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
The following BLAST results are available for this feature:
BLAST of CB304657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 204
Match NameE-valueIdentityDescription
CALM2_SOYBN1.247e-29100.00Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2[more]
CALM2_ORYSJ1.247e-29100.00Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM2_ORYSI1.247e-29100.00Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2... [more]
CALM1_PETHY1.247e-29100.00Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2[more]
CALM1_ORYSJ1.247e-29100.00Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI1.247e-29100.00Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM1_DAUCA1.247e-29100.00Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 ... [more]
CALM_CAPAN2.778e-2998.44Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3[more]
CALM5_SOLTU2.778e-2998.44Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE... [more]
CALM3_ORYSI2.778e-2998.44Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIIaR_A10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIIaR_A10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304657 ID=CB304657; Name=CB304657; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGCCAAGAAACCTAAGCTGA
TAGCCTGATACATAAAATAGGATACATATTTCGACCAAAAGAAAAATAAA
CATCGCAAGGGCAGAAATTAATGAAACACATTAAACAGACAACAACATTC
ATAGAACAGCAGAACAACTAAAATAATAAAAACCGAAAAGTTTTGCGAGT
CACAAGACATATTGACGAGGGAGACAACATTCTTCCTACACCATCAGGCC
CATCACCATTAAAAGACCATTGCTTCCTTTAGCCTGACCCTCATGACTAT
CAAATTAAAAATTGTAAAAGAGAAAACTAGGAATCCCTTTATAATTTAGT
CAACCCATTTTATAAGTATTGGGGGGTTGGGGTCATTACTTGGCCATCAT
AACCTTGACAAATTCCTCATAATTTATCTGGCCATCACCATCAACATCAG
CTTCCCTTATCATCTCATCGACTTCTTCATCAGTAAGTTTCTCTCCTAGG
TTTGTCATCACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATC
CTTGTCGAAAACCCGGAAGGCCTCTTTCAGC
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