CB304673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_AERPE (30S ribosomal protein S19P OS=Aeropyrum pernix GN=rps19p PE=3 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.134e-24 Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = -1 Query: 284 MSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPG--EKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 637 M +EL +LF AR RR RGL L+ K+RK +R G ++P +RTH+R+M+I+PEM+G I VYNGK F V+I PEMIGHYL EFS + + V+HG PG+ AT SS + K Sbjct: 25 MDIEELARLFPARQRRSLLRGLTPAQQKLLLKVRKIRRRLEEGRLKRPPVIRTHVRDMVILPEMVGLTIAVYNGKEFIPVKIVPEMIGHYLGEFSPTTRIVQHGEPGLKATRSSLHVASK 144
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_HALWD (30S ribosomal protein S19P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps19p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.482e-24 Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = -1 Query: 284 MSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKP-EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 637 MS +++ L AR RR +RGL + +KLR+ R+A P + +P+RTHLR+M I+P + I VYNG++F +V I+PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 26 MSLEDITALLPARQRRTIERGLTTEQ----QKLRETVRDADPQKTANDPIRTHLRDMPILPSFVEKTIAVYNGQSFERVRIEPEMIGHYLGEFQLTRTSVEHGQAGIGATRSSKFVPLK 140
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_THEVO (30S ribosomal protein S19P OS=Thermoplasma volcanium GN=rps19p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.527e-24 Identity = 55/119 (46.22%), Postives = 81/119 (68.07%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 +MS +EL+K+ ARARR R + L++KL G+ + ++TH+R++II+P +G I+ VYNG ++++ EIKPEMIGHYL EF ++ K VKH PG+GAT SS+F+PLK Sbjct: 42 EMSLEELIKILPARARRSLSREMNHDQKKLVEKLE--------GDYDD-IKTHVRDVIILPSYVGKIVEVYNGNSYSKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_THENV (30S ribosomal protein S19P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps19p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.527e-24 Identity = 60/115 (52.17%), Postives = 78/115 (67.83%), Query Frame = -1 Query: 284 DELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 628 DE +KL AR RR +RGLK + L++K+RKAKR A G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ K V+HG PG+ AT SS I K Sbjct: 45 DEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKVT-IKTHSRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKVVQHGEPGLKATRSSLHIAAK 158
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_THEPD (30S ribosomal protein S19P OS=Thermofilum pendens (strain Hrk 5) GN=rps19p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.301e-24 Identity = 56/122 (45.90%), Postives = 82/122 (67.21%), Query Frame = -1 Query: 284 MSNDELVKLFSARARRR----FQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 637 M ++L ++ AR RR F++G + + L++K+R+A + A G+K ++THLR+ II+PEM+G I V+NGK F VEI PE IGHYL EF+++ K V+HG PG+ AT SS F+ LK Sbjct: 20 MPIEKLAEIMPARQRRSLLRVFKQGTSEEHLKLLEKIRRAAKLASEGKKQPVIKTHLRDFIILPEMVGLTIHVHNGKEFVPVEITPEKIGHYLGEFALTTKKVEHGEPGLKATRSSMFVALK 141
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_ARCFU (30S ribosomal protein S19P OS=Archaeoglobus fulgidus GN=rps19p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.301e-24 Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = -1 Query: 284 MSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 637 M +EL KL AR RR+ +RG + L++KLRK RTH R+M+++PEM+G ++ V+NGK F +VEIKPEMIGH L EF+++ + KH PG+GAT SS+++PLK Sbjct: 26 MPLEELAKLLPARERRKIKRGFTEQEEKLLRKLRKKGT----------ARTHCRDMVVLPEMVGKVVFVHNGKEFVRVEIKPEMIGHRLGEFALTRRFEKHSGPGVGATRSSKYVPLK 133
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_KORCO (30S ribosomal protein S19P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps19p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.311e-24 Identity = 57/118 (48.31%), Postives = 80/118 (67.80%), Query Frame = -1 Query: 284 MSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 637 M+ DEL + +R RR +RGL + L+ K+RK K + +RTH R+M I+PEM+GS I V+NGK F ++ I PEMIGHYL EF+++ + V+HG+PG GAT SS+F+PLK Sbjct: 19 MTLDELANVMPSRIRRTLKRGLSIENKKLLDKIRKYKAMGID----KVIRTHRRDMPILPEMVGSKIAVHNGKEFVEITIVPEMIGHYLGEFAMTNRIVRHGKPGKGATRSSKFVPLK 132
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_IGNH4 (30S ribosomal protein S19P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps19p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.311e-24 Identity = 57/119 (47.90%), Postives = 79/119 (66.39%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 +M D+ ++L AR RR +RG L++K+ KA++E G+K + +RTH+R+M+I+P M+G I VYNGK F V+I PEMIGHYL EFS + VKHG PG+ AT SS F+ K Sbjct: 22 EMPLDDFIELLPARQRRSLKRGFNDAQRRLLEKVLKARKEMEKGKKVK-IRTHVRDMVILPIMVGLTIEVYNGKEFVPVKIVPEMIGHYLGEFSHTTAVVKHGEPGLKATRSSLFVAAK 139
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_META3 (30S ribosomal protein S19P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps19p PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24 Identity = 52/119 (43.70%), Postives = 78/119 (65.55%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 +M + +++ AR RR ++G+ K L+ K++KA+R A G+ P +RTH R+ +I PEMIG G+YNGK F +V++ E IG +L EF+ S K V+HG PG+GAT S F+P+K Sbjct: 44 EMPIKKFMEIVPARQRRSMKKGITPKQRKLVMKIKKARRLANRGKDPRTIRTHCRDFVITPEMIGLPFGIYNGKEFIEVKLVEEAIGRFLGEFAPSRKVVQHGSPGMGATRGSMFVPIK 162
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_PYRIL (30S ribosomal protein S19P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps19p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.353e-24 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 +M DE +KL AR RR +RGLK + L++K+RKAK+ G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+I+ K V+HG PG+ AT SS I K Sbjct: 43 NMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKKLMAQGKKVV-IKTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFAITTKIVQHGEPGLKATRSSLHIAAK 160 The following BLAST results are available for this feature:
BLAST of CB304673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304673 ID=CB304673; Name=CB304673; organism=Citrus sinensis; type=EST; length=640bpback to top |