CB304673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_METBF (30S ribosomal protein S19P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps19p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19 Identity = 48/119 (40.34%), Postives = 73/119 (61.34%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 ++S +E +L +R RR +RG ++ + ++ K+ VRTH R++II+PEMIG I ++NGK F V+++PEMIGH EF+ + V HG G+GAT SS+F+PLK Sbjct: 28 ELSLEEFAELLPSRERRSIKRGFTDGQKKVLHEFKEGKK----------VRTHHRDLIILPEMIGQTIEIHNGKGFVSVDLQPEMIGHRFGEFAPTRSRVSHGSAGVGATRSSKFVPLK 136
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_METLZ (30S ribosomal protein S19P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps19p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19 Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = -1 Query: 284 MSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 637 MS DEL+ + + ARR+ RG R + K+ + + VRTH R+MII+PEM+G + +Y+GK F VEI E + HY EF+++ K V HG GIGAT SS+++PLK Sbjct: 29 MSMDELLAIMPSGARRKVLRGFTRDEEDVRAKIAEG----------DGVRTHSRSMIILPEMVGKNVAIYSGKEFINVEIPVEGVFHYFGEFALTRKKVTHGSAGIGATKSSKYVPLK 136
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS19_UNCMA (30S ribosomal protein S19P OS=Uncultured methanogenic archaeon RC-I GN=rps19p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18 Identity = 44/115 (38.26%), Postives = 70/115 (60.87%), Query Frame = -1 Query: 284 DELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 628 +++ L AR RR+ +R + L+ ++ + + ++THLR+MII+PEM+G ++NGK + VE PEM+GHYL EF+++ V HG GIGAT S+++PLK Sbjct: 35 NQVAALLPARQRRKIKREFGEEHQKLLNAVKAGETK---------IKTHLRDMIILPEMVGVTFEIHNGKEWKAVETTPEMVGHYLGEFALTRHSVSHGSAGIGATRGSKYVPLK 140 The following BLAST results are available for this feature:
BLAST of CB304673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304673 ID=CB304673; Name=CB304673; organism=Citrus sinensis; type=EST; length=640bpback to top |