CB304784

Overview
NameCB304784
Unique NameCB304784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_PLAFK (Glutathione reductase OS=Plasmodium falciparum (isolate K1 / Thailand) GN=GR2 PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 2.366e-21
Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = -3
Query:  258 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV------FTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLR 605
            K +Y  +P+ +FS PPIG +GLSEE AIQ YG  +V      FT  F  +      L ++ ++KLV   K   + GL + G +A EIVQGFAVA+K   TK DFD  + +HPTAAEEF+ L+
Sbjct:  375 KTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQ 496          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_PLAF7 (Glutathione reductase OS=Plasmodium falciparum (isolate 3D7) GN=GR3 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 2.366e-21
Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = -3
Query:  258 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDV------FTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLR 605
            K +Y  +P+ +FS PPIG +GLSEE AIQ YG  +V      FT  F  +      L ++ ++KLV   K   + GL + G +A EIVQGFAVA+K   TK DFD  + +HPTAAEEF+ L+
Sbjct:  375 KTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQ 496          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_YEAST (Glutathione reductase OS=Saccharomyces cerevisiae GN=GLR1 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 5.271e-21
Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = -3
Query:  258 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLR 605
            K DY  VPS +FS P  G +G+SE++AI++YG  +I V+ + F  +   +         K+V      KV+GL + G+ + EI+QGF VA+K G TKADFD  V +HPT+AEE V +R
Sbjct:  366 KLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTMR 483          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_CANGA (Glutathione reductase OS=Candida glabrata GN=GLR1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.271e-21
Identity = 52/118 (44.07%), Postives = 75/118 (63.56%), Query Frame = -3
Query:  258 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLR 605
            K DY+ VPS VFS P  G +GL+E++AI++YG  +I V+T+ F  +   +         K++      KV+GL + G+ + EI+QGF VA+K G TKADFD  V +HPT+AEE V +R
Sbjct:  359 KLDYTNVPSVVFSHPEAGSIGLTEDEAIKQYGKDNIKVYTSKFTAMYYAMLEHKSPTRYKIICEGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTMR 476          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TYTR_LEIDO (Trypanothione reductase OS=Leishmania donovani GN=TPR PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21
Identity = 49/117 (41.88%), Postives = 76/117 (64.96%), Query Frame = -3
Query:  252 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTN-KVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTP 599
            D++ V  AVFS PPIG  G++EE+A + Y  + V+ ++F PL   +SG   + FM  ++  ++N +VLG+ M G+ APEI+Q   + +K G   +DF + +GVHPT+AEE   +RTP
Sbjct:  358 DHTKVACAVFSIPPIGTCGMTEEEAAKNYETVAVYASSFTPLMHNISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSMRTP 474          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_KLULA (Glutathione reductase OS=Kluyveromyces lactis GN=GLR1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.992e-21
Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = -3
Query:  261 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRI--FMKLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPL 605
            K DY  VPS VFS P  G +GLSE +AI+++G  ++ V+ + F  +   +    D+     KLV   +  KV+GL + G+ + EI+QGF VA+K G TKADFD+ V +HPT+AEE V L
Sbjct:  365 KQDYENVPSVVFSHPEAGSIGLSEREAIEKFGKDNVKVYNSKFNAMYYAMMEEKDKTPTRYKLVCTGEEEKVVGLHIIGDSSAEILQGFGVAIKMGATKADFDSCVAIHPTSAEELVTL 483          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_ASHGO (Glutathione reductase OS=Ashbya gossypii GN=GLR1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.174e-20
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = -3
Query:  258 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLR 605
            K DY  VPS VFS P  G +GL+E QAI+ YG  +I ++   F  +   +         KL+      KV+GL + G+ + EI+QGF VA+K G TKADFD+ V +HPT+AEE V L+
Sbjct:  363 KQDYDNVPSVVFSHPEAGSIGLTEPQAIERYGKENIKIYQTKFTAMYYAMLEDKSPTKYKLICAGPEEKVVGLHIVGDGSAEILQGFGVAIKMGATKADFDSCVAIHPTSAEEIVTLK 480          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_SCHPO (Glutathione reductase OS=Schizosaccharomyces pombe GN=pgr1 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.534e-20
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = -3
Query:  261 DYSAVPSAVFSQPPIGQVGLSEEQAIQEYGD--IDVFTANFRPLKATLSGLPDRI--FMKLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPL 599
            DY  VPS VF+ P  G +GL+E++AI +YG+  I V+   F  L  ++    D++    KLV      KV+GL + G+ + EI+QGF VA+K G TK+DFD+ V +HPT+AEE V L
Sbjct:  347 DYEEVPSVVFAHPEAGTIGLTEQEAIDKYGESQIKVYNTKFNGLNYSMVEQEDKVPTTYKLVCAGPLQKVVGLHLVGDFSAEILQGFGVAIKMGATKSDFDSCVAIHPTSAEELVTL 463          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: GSHR_DICDI (Glutathione reductase OS=Dictyostelium discoideum GN=gsr PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.696e-19
Identity = 53/117 (45.30%), Postives = 72/117 (61.54%), Query Frame = -3
Query:  261 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYG--DIDVFTANFRPLKATLSGLPDRIFMKLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPL 605
            K +Y  V + VFS PPIG VGL+E++AI +YG  +I  +  +F  +  ++     R  MKLV   K  KV+GL + G+   EI+QGFAVAVK G TK D D    +HPT+AEE V +
Sbjct:  348 KFEYENVATVVFSHPPIGTVGLTEQEAITKYGTENIKCYNTSFINMFYSVQVHKVRTSMKLVCLGKEEKVIGLHIIGDGCDEIIQGFAVAVKMGCTKWDLDNTCAIHPTSAEELVTM 464          
BLAST of CB304784 vs. ExPASy Swiss-Prot
Match: TYTR_TRYCR (Trypanothione reductase OS=Trypanosoma cruzi GN=TPR PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.893e-19
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = -3
Query:  249 KPDYSAVPSAVFSQPPIGQVGLSEEQAIQEYGDIDVFTANFRPLKATLSGLPDRIFM-KLVLCAKTNKVLGLPMCGEDAPEIVQGFAVAVKAGLTKADFDAPVGVHPTAAEEFVPLRTPT 605
            K D++ V SAVFS PPIG  GL EE A + Y  + V+ ++F PL   +SG   + F+ K++       VLG+ + G++APEI+QG  + +K     +DF   +GVHPT+AEE   +RTP+
Sbjct:  356 KTDHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSFTPLMHNISGSKYKTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPTSAEELCSMRTPS 475          
The following BLAST results are available for this feature:
BLAST of CB304784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
GSHR_PLAFK2.366e-2145.90Glutathione reductase OS=Plasmodium falciparum (is... [more]
GSHR_PLAF72.366e-2145.90Glutathione reductase OS=Plasmodium falciparum (is... [more]
GSHR_YEAST5.271e-2143.22Glutathione reductase OS=Saccharomyces cerevisiae ... [more]
GSHR_CANGA5.271e-2144.07Glutathione reductase OS=Candida glabrata GN=GLR1 ... [more]
TYTR_LEIDO6.885e-2141.88Trypanothione reductase OS=Leishmania donovani GN=... [more]
GSHR_KLULA8.992e-2144.54Glutathione reductase OS=Kluyveromyces lactis GN=G... [more]
GSHR_ASHGO1.174e-2044.07Glutathione reductase OS=Ashbya gossypii GN=GLR1 P... [more]
GSHR_SCHPO1.534e-2044.44Glutathione reductase OS=Schizosaccharomyces pombe... [more]
GSHR_DICDI1.696e-1945.30Glutathione reductase OS=Dictyostelium discoideum ... [more]
TYTR_TRYCR2.893e-1941.67Trypanothione reductase OS=Trypanosoma cruzi GN=TP... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_H01 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_H01 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304784 ID=CB304784; Name=CB304784; organism=Citrus sinensis; type=EST; length=610bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTCCACCTTGAAGGGTAT
ATAACAGAGAAATAACAGTAAATCTAAATGAACATATCCTTAATCCTACT
CAGCAAGAAATACTGACACCTACTCGCCTTGAAATTGCCTTCTAAAACAT
GCAGCAAATTGATTGCTTCTACTCTACTAAACTCCTGCTGCAGCCTTAAC
CTCAGGACCAGTCATTCCCTCAGACGGAGGGCTCTTTCTGATCTTCCGAG
TAGGCGTCCTCAATGGGACAAACTCCTCTGCTGCCGTTGGATGAACACCC
ACTGGGGCATCAAAGTCTGCCTTAGTCAGACCAGCTTTGACAGCAACAGC
AAATCCCTGCACAATTTCAGGGGCATCTTCTCCACACATGGGCAAACCCA
GAACTTTGTTCGTCTTTGCACATAATACAAGTTTCATGAAGATCCTGTCT
GGAAGCCCAGAGAGAGTAGCTTTTAGTGGTCTGAAATTTGCTGTGAAGAC
ATCAATGTCACCATATTCTTGTATAGCCTGTTCTTCAGAAAGACCAACTT
GTCCAATTGGTGGCTGAGAAAAGACTGCAGATGGAACAGCGCTGTAATCA
GGTTTTGTTG
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