CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:259..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 5.115e-79
Identity = 155/190 (81.58%), Postives = 160/190 (84.21%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDN----NLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLLQDFFNGKELCKS NPDE          AILSGEGNE+  DLLLLDVTP SLGLETAGGVMTVLIPRNTTIP KKEQ+FSTY DNQPGVLIQVYEGER RTRDN     LLGKFEL+GIPPAPRGVPQI V FDIDANGILNV AEDKT G KNKITI ND GRLSKDEIEK+V+EAE
Sbjct:  343 GGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNER-SDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTRDNKLLGKLLGKFELTGIPPAPRGVPQINVVFDIDANGILNVFAEDKTAGVKNKITITNDNGRLSKDEIEKLVKEAE 531          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 1.179e-75
Identity = 145/186 (77.96%), Postives = 153/186 (82.26%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQQLLQ+FFNGKEL KS NPDE          AILS EG  KV DLLLLDV P S+GLETAGGVMT LIPRNTTIP KK Q FSTY DNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQ+ V FD+DANGILNVSAEDK+ G K KITI NDKGRLSK+EIEKMV +AE
Sbjct:  336 GGSTRIPKVQQLLQEFFNGKELNKSINPDEAVAYGAAVQAAILSNEGGAKVADLLLLDVAPLSMGLETAGGVMTTLIPRNTTIPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQVEVTFDVDANGILNVSAEDKSTGNKQKITITNDKGRLSKEEIEKMVADAE 521          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.431e-75
Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = -1
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPK+Q+LLQDFFNGKEL KS NPDE          AILSG+ +E VQDLLLLDVTP SLG+ETAGGVMTVLI RNTTIP K+ Q F+TY DNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+ G++NKITI NDKGRLSK++IE+MVQEAE
Sbjct:  338 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAE 523          
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_DAUCA5.115e-7981.58Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HS7C1_DICDI1.179e-7577.96Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP7C_SAGOE3.431e-7576.88Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT3.431e-7576.88Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB3.431e-7576.88Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE3.431e-7576.88Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN3.431e-7576.88Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE3.431e-7576.88Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR3.431e-7576.88Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_CHICK3.431e-7576.88Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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