CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_DELAS (Chaperone protein dnaK OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.512e-51
Identity = 108/186 (58.06%), Postives = 134/186 (72.04%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ +++FF GK+  K  NPDE           +LSG+     +D+LLLDVTP SLG+ET GGVMT +I +NTTIP K  Q FST  DNQP V I+V++GER     N +LG+F L GIPPA RGVPQI V FDIDANGILNVSA+DK  G++NKITI  + G LS+DEI+KMV++AE
Sbjct:  342 GGMTRMPKVQEKVKEFF-GKDPRKDVNPDEAVAVGAAVQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKFAQTFSTADDNQPAVTIKVFQGEREMASGNKMLGEFNLEGIPPAARGVPQIEVAFDIDANGILNVSAKDKASGKENKITIKANSG-LSEDEIQKMVKDAE 521
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HELPH (Chaperone protein dnaK OS=Helicobacter pylori (strain HPAG1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.893e-51
Identity = 112/186 (60.22%), Postives = 129/186 (69.35%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+ ++ F N KEL KS NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT +I R TTIP KK QVFST  DNQP V I V +GER   RDN  LGKF+L GI PAPRGVPQI V FDIDANGIL VSA+DK  G+  +I I+   G LS  EIEKMV++AE
Sbjct:  335 GGSTRIPKVQERVKAFIN-KELNKSVNPDEVVAVGASIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSG-LSDSEIEKMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HELP2 (Chaperone protein dnaK OS=Helicobacter pylori (strain P12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.893e-51
Identity = 112/186 (60.22%), Postives = 129/186 (69.35%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+ ++ F N KEL KS NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT +I R TTIP KK QVFST  DNQP V I V +GER   RDN  LGKF+L GI PAPRGVPQI V FDIDANGIL VSA+DK  G+  +I I+   G LS  EIEKMV++AE
Sbjct:  335 GGSTRIPKVQERVKAFIN-KELNKSVNPDEVVAVGASIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSG-LSDSEIEKMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_THEYD (Chaperone protein dnaK OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dnaK PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.005e-50
Identity = 110/186 (59.14%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR PKVQ+++QDFF GKE  K  NPDE          AIL GE    V+++LLLDVTP SLG+ET GGV T +I RNTTIP KK Q+F+T  DNQ  V I+VY+GER    DN LLG FEL GIPPAPRG+PQI V FDIDANGIL+VSA+D   G++  I I    G LS++EI+KM++EAE
Sbjct:  336 GGQTRTPKVQKVVQDFF-GKEPHKGVNPDEVVAVGAAIQAAILKGE----VKEVLLLDVTPLSLGIETLGGVFTKIIERNTTIPTKKSQIFTTAADNQTAVTIKVYQGEREMAADNKLLGVFELVGIPPAPRGIPQIEVTFDIDANGILHVSAKDLATGKEQSIRITASSG-LSEEEIKKMIREAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCMM (Chaperone protein dnaK OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=dnaK PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.005e-50
Identity = 106/186 (56.99%), Postives = 131/186 (70.43%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V +L+++   GKE  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T  DNQP V IQVY+GER     N LLG FEL+GIPPAPRGVPQI V FDIDANGI++V+A+DK  G++N I I    G LSKDEI++M+++AE
Sbjct:  314 GGSTRMPAVTELVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIAAHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSG-LSKDEIDRMIKDAE 494
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_FRAP2 (Chaperone protein dnaK OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dnaK PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.005e-50
Identity = 109/186 (58.60%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +++FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP KK QVFST  DNQP V I V +GER     N  LG+F+L+ IPPAPRG+PQI V FDIDANGILNVSA+DK  G++  I I +  G LS+D+IEKMVQ+AE
Sbjct:  343 GGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAEDNQPAVTIHVLQGEREMASANKSLGRFDLADIPPAPRGIPQIEVTFDIDANGILNVSAKDKATGKEQNIVIKSSSG-LSEDDIEKMVQDAE 522
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HELPY (Chaperone protein dnaK OS=Helicobacter pylori GN=dnaK PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.313e-50
Identity = 111/186 (59.68%), Postives = 129/186 (69.35%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+ ++ F N K+L KS NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT +I R TTIP KK QVFST  DNQP V I V +GER   RDN  LGKF+L GI PAPRGVPQI V FDIDANGIL VSA+DK  G+  +I I+   G LS  EIEKMV++AE
Sbjct:  335 GGSTRIPKVQERVKAFIN-KDLNKSVNPDEVVAVGASIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSG-LSDSEIEKMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HELPS (Chaperone protein dnaK OS=Helicobacter pylori (strain Shi470) GN=dnaK PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.313e-50
Identity = 111/186 (59.68%), Postives = 129/186 (69.35%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+ ++ F N K+L KS NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT +I R TTIP KK QVFST  DNQP V I V +GER   RDN  LGKF+L GI PAPRGVPQI V FDIDANGIL VSA+DK  G+  +I I+   G LS  EIEKMV++AE
Sbjct:  335 GGSTRIPKVQERVKAFIN-KDLNKSVNPDEVVAVGASIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSG-LSDSEIEKMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HELPJ (Chaperone protein dnaK OS=Helicobacter pylori J99 GN=dnaK PE=2 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 1.313e-50
Identity = 111/186 (59.68%), Postives = 129/186 (69.35%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+ ++ F N KEL KS NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT +I R TTIP KK QVFST  DNQP V I V +GER   RDN  LGKF+L GI PAPRG+PQI V FDIDANGIL VSA+DK  G+  +I I+   G LS  EIEKMV++AE
Sbjct:  335 GGSTRIPKVQERVKAFIN-KELNKSVNPDEVVAVGASIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGMPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSG-LSDSEIEKMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_HELPG (Chaperone protein dnaK OS=Helicobacter pylori (strain G27) GN=dnaK PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.313e-50
Identity = 111/186 (59.68%), Postives = 129/186 (69.35%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIPKVQ+ ++ F N K+L KS NPDE           +L G+    V+D+LLLDVTP SLG+ET GGVMT +I R TTIP KK QVFST  DNQP V I V +GER   RDN  LGKF+L GI PAPRGVPQI V FDIDANGIL VSA+DK  G+  +I I+   G LS  EIEKMV++AE
Sbjct:  335 GGSTRIPKVQERVKAFIN-KDLNKSVNPDEVVAVGASIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSG-LSDSEIEKMVKDAE 514
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_DELAS4.512e-5158.06Chaperone protein dnaK OS=Delftia acidovorans (str... [more]
DNAK_HELPH5.893e-5160.22Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_HELP25.893e-5160.22Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_THEYD1.005e-5059.14Chaperone protein dnaK OS=Thermodesulfovibrio yell... [more]
DNAK_MYCMM1.005e-5056.99Chaperone protein dnaK OS=Mycobacterium marinum (s... [more]
DNAK_FRAP21.005e-5058.60Chaperone protein dnaK OS=Francisella philomiragia... [more]
DNAK_HELPY1.313e-5059.68Chaperone protein dnaK OS=Helicobacter pylori GN=d... [more]
DNAK_HELPS1.313e-5059.68Chaperone protein dnaK OS=Helicobacter pylori (str... [more]
DNAK_HELPJ1.313e-5059.68Chaperone protein dnaK OS=Helicobacter pylori J99 ... [more]
DNAK_HELPG1.313e-5059.68Chaperone protein dnaK OS=Helicobacter pylori (str... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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