CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RICTY (Chaperone protein dnaK OS=Rickettsia typhi GN=dnaK PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50
Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ ++ FF G+E  K  NPDE           +L    N++V D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER   +DN LLG+F L GIPPAPRGVPQI V FDIDANGI++VSA+DK  G++ K+TI    G LS  EIE+MV++AE
Sbjct:  335 GGMTRMPKVQEAVKKFF-GREPHKGVNPDEVVALGAAIQGGVL----NKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKASGKEQKVTI-QASGGLSDSEIEQMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RICFE (Chaperone protein dnaK OS=Rickettsia felis GN=dnaK PE=2 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50
Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ ++ FF G+E  K  NPDE           +L    N++V D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER   +DN LLG+F L GIPPAPRGVPQI V FDIDANGI++VSA+DK  G++ K+TI    G LS  EIE+MV++AE
Sbjct:  335 GGMTRMPKVQEAVKKFF-GREPHKGVNPDEVVALGAAIQGGVL----NKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKASGKEQKVTI-QASGGLSDSEIEQMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_METNO (Chaperone protein dnaK OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaK PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50
Identity = 108/186 (58.06%), Postives = 133/186 (71.51%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+Q +++ FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRGVPQI V FDIDANGI+NV+A+DK  G++++I I    G LS+ EI++MVQEAE
Sbjct:  336 GGMTRMPKIQDVVKTFF-GKEPHKGVNPDEVVAIGAAVQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVTAKDKATGKEHQIRI-QASGGLSETEIQRMVQEAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_FRATW (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaK PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50
Identity = 109/186 (58.60%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +++FF GKE  K  NPDE           +LSG+    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP KK QVFST  DNQP V I V +GER     N  LG+F+L+ IPPAPRG+PQI V FDIDANGILNVSA+DK  G++  I I +  G LS+++IEKMVQ+AE
Sbjct:  343 GGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLSGD----VKDILLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAEDNQPAVTIHVLQGEREMASANKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQNIVIKSSSG-LSEEDIEKMVQDAE 522
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_OLICO (Chaperone protein dnaK OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.239e-50
Identity = 107/186 (57.53%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+Q++++ FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T +I RNTTIP KK QVFST  DNQ  V I+V++GER    DN  LG+F+L GIPPAPRG+PQI V FDIDANGI+NVSA+DK  G++ +I I    G LS+ EIEKMV+EAE
Sbjct:  336 GGMTRMPKIQEVVKQFF-GKEPHKGVNPDEVVAIGAAIQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRIIERNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKALGQFDLMGIPPAPRGMPQIEVTFDIDANGIVNVSAKDKATGKEQQIRI-QASGGLSESEIEKMVKEAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_GRABC (Chaperone protein dnaK OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.239e-50
Identity = 108/186 (58.06%), Postives = 133/186 (71.51%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKV + ++ FF GKE  ++ NPDE          A+L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQP V I+VY+GER    DN  LG+F+L+G+PPAPRGVPQI V FDIDANGI+NVSA+DK  G++ +I I    G LS  +I++MVQEAE
Sbjct:  336 GGMTRMPKVIEAVKQFF-GKEPARNVNPDEVVAIGAAVQGAVLKGD----VKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQPAVTIKVYQGEREMAADNKSLGQFDLTGLPPAPRGVPQIEVTFDIDANGIVNVSAKDKATGKEQQIRI-QASGGLSDADIQRMVQEAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BARHE (Chaperone protein dnaK OS=Bartonella henselae GN=dnaK PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.239e-50
Identity = 108/186 (58.06%), Postives = 133/186 (71.51%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+Q+++Q FF GK+  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRGVPQI V FDIDANGI+NVSA+DK  G++++I I    G LS  +IEKMV++AE
Sbjct:  336 GGMTRMPKIQEVVQSFF-GKDPHKGVNPDEVVAMGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTADDNQNAVTIRVFQGEREMANDNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRI-QASGGLSDADIEKMVKDAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50
Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ ++ FF G+E  K  NPDE           +L    N++V D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER   +DN LLG+F L GIPPAPRGVPQI V FDIDANGI++VSA+DK  G++ K+TI    G LS  EIE+MV++AE
Sbjct:  335 GGMTRMPKVQEAVKKFF-GREPHKGVNPDEVVALGAAIQGGVL----NKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKASGKEQKVTI-QASGGLSDAEIEQMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RALME (Chaperone protein dnaK OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaK PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50
Identity = 106/186 (56.99%), Postives = 133/186 (71.51%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ +++FF GKE  K  NPDE          ++LSG+      D+LLLDVTP SLG+ET GGVMT +I +NTTIP K  QVFST  DNQP V I+VY+GER     N +LG+F L GI PAPRG PQI V FDIDANGIL+V A+DK  G++N+ITI  + G LS+DEI++MV++AE
Sbjct:  342 GGMTRMPKVQEQVREFF-GKEARKDVNPDEAVAVGAAIQGSVLSGDRT----DVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVFSTADDNQPAVTIKVYQGEREMATGNKMLGEFNLEGIAPAPRGTPQIEVSFDIDANGILHVGAKDKATGKENRITIKANSG-LSEDEIQRMVKDAE 521
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_METS4 (Chaperone protein dnaK OS=Methylobacterium sp. (strain 4-46) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50
Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+Q +++ FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRGVPQI V FDIDANGI+NV+A+DK  G++++I I    G LS  EI++MVQEAE
Sbjct:  336 GGMTRMPKIQDVVKTFF-GKEPHKGVNPDEVVAIGAAVQAGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVTAKDKATGKEHQIRI-QASGGLSDTEIQRMVQEAE 515
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RICTY1.715e-5058.06Chaperone protein dnaK OS=Rickettsia typhi GN=dnaK... [more]
DNAK_RICFE1.715e-5058.06Chaperone protein dnaK OS=Rickettsia felis GN=dnaK... [more]
DNAK_METNO1.715e-5058.06Chaperone protein dnaK OS=Methylobacterium nodulan... [more]
DNAK_FRATW1.715e-5058.60Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_OLICO2.239e-5057.53Chaperone protein dnaK OS=Oligotropha carboxidovor... [more]
DNAK_GRABC2.239e-5058.06Chaperone protein dnaK OS=Granulibacter bethesdens... [more]
DNAK_BARHE2.239e-5058.06Chaperone protein dnaK OS=Bartonella henselae GN=d... [more]
DNAK_RICPR2.925e-5058.06Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_RALME2.925e-5056.99Chaperone protein dnaK OS=Ralstonia metallidurans ... [more]
DNAK_METS42.925e-5058.06Chaperone protein dnaK OS=Methylobacterium sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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