CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BIFLO (Chaperone protein dnaK OS=Bifidobacterium longum GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50
Identity = 104/186 (55.91%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V++L+++   GKE  +S NPDE           ++ G+     +D+LL+DVTP SLG+ET GG+MT LI RNT IP K+ +VFST  DNQP VLIQVY+GER   RDN  LG FEL+GI PAPRGVPQI V FDIDANGI++VSA+DK  G++  +TI    G L KDEI++MV+EAE
Sbjct:  319 GGSTRMPAVKELVKELTGGKEANQSVNPDEVVAVGAAVQSGVIKGDR----KDVLLIDVTPLSLGIETKGGIMTKLIDRNTAIPTKRSEVFSTAEDNQPSVLIQVYQGEREFARDNKPLGTFELTGIAPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGSG-LPKDEIDRMVKEAE 499
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BIFLD (Chaperone protein dnaK OS=Bifidobacterium longum (strain DJO10A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50
Identity = 104/186 (55.91%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V++L+++   GKE  +S NPDE           ++ G+     +D+LL+DVTP SLG+ET GG+MT LI RNT IP K+ +VFST  DNQP VLIQVY+GER   RDN  LG FEL+GI PAPRGVPQI V FDIDANGI++VSA+DK  G++  +TI    G L KDEI++MV+EAE
Sbjct:  319 GGSTRMPAVKELVKELTGGKEANQSVNPDEVVAVGAAVQSGVIKGDR----KDVLLIDVTPLSLGIETKGGIMTKLIDRNTAIPTKRSEVFSTAEDNQPSVLIQVYQGEREFARDNKPLGTFELTGIAPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGSG-LPKDEIDRMVKEAE 499
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BIFAA (Chaperone protein dnaK OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50
Identity = 104/186 (55.91%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V++L+++   GKE  +S NPDE           ++ G+     +D+LL+DVTP SLG+ET GG+MT LI RNT IP K+ +VFST  DNQP VLIQVY+GER   RDN  LG FEL+GI PAPRGVPQI V FDIDANGI++VSA+DK  G++  +TI    G L KDEI++MV+EAE
Sbjct:  319 GGSTRMPAVKELVKELTGGKEANQSVNPDEVVAVGAAVQSGVIKGDR----KDVLLIDVTPLSLGIETKGGIMTKLIERNTAIPTKRSEVFSTAEDNQPSVLIQVYQGEREFARDNKPLGTFELTGIAPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGSG-LPKDEIDRMVKEAE 499
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_ACIAC (Chaperone protein dnaK OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50
Identity = 109/186 (58.60%), Postives = 134/186 (72.04%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ +++FF GKE  K  NPDE           +LSG+     +D+LLLDVTP SLG+ET GGVMT +I +NTTIP K  Q FST  DNQP V I+V++GER     N LLG+F L GIPPA RGVPQI V FDIDANGIL+VSA+DK  G++NKITI  + G LS+DEI+KMV++AE
Sbjct:  342 GGMTRMPKVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGQVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKFAQTFSTADDNQPAVTIKVFQGEREIASANKLLGEFNLEGIPPAGRGVPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQKMVKDAE 521
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_SOLUE (Chaperone protein dnaK OS=Solibacter usitatus (strain Ellin6076) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.820e-50
Identity = 105/186 (56.45%), Postives = 131/186 (70.43%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P++Q L+++ F  ++  +  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP +K +VFST  DNQP V I+VY+GER   RDN LLG F+L  IPPAPRGVPQI V FDIDANGILNV+A+D+    + KITI +  G LSKDE+EKM ++AE
Sbjct:  334 GGQTRMPRIQTLVRELFQ-RDPHQGVNPDEVVAIGAAVQGGVLGGE----VKDVLLLDVTPLSLGIETMGGVFTKLIERNTTIPTRKSEVFSTASDNQPSVEIKVYQGERAMARDNRLLGVFQLGNIPPAPRGVPQIEVTFDIDANGILNVTAKDRGTNNEQKITITSSSG-LSKDEVEKMARDAE 513
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RALEH (Chaperone protein dnaK OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.820e-50
Identity = 106/186 (56.99%), Postives = 133/186 (71.51%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ +++FF GKE  K  NPDE          ++LSG+      D+LLLDVTP SLG+ET GGVMT +I +NTTIP K  QVFST  DNQP V I+V++GER     N LLG+F L GIPPA RG PQI V FDIDANGIL+V A+DK  G++N+ITI  + G LS+DEI++MV++AE
Sbjct:  342 GGMTRMPKVQEQVKEFF-GKEARKDVNPDEAVAVGAAIQGSVLSGDRT----DVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKHAQVFSTADDNQPAVTIKVFQGEREMASGNKLLGEFNLEGIPPAARGTPQIEVSFDIDANGILHVGAKDKATGKENRITIKANSG-LSEDEIQRMVKDAE 521
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCLE (Chaperone protein dnaK OS=Mycobacterium leprae GN=dnaK PE=1 SV=5)

HSP 1 Score: 197.593 bits (501), Expect = 3.820e-50
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V  L+++   GKE  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T  DNQP V IQVY+GER     N LLG FEL+GIPPAPRGVPQI V FDIDANGI++V+A+DK  G++N I I    G LSK+EI++MV++AE
Sbjct:  314 GGSTRMPAVTDLVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIASHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQEGSG-LSKEEIDRMVKDAE 494
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCLB (Chaperone protein dnaK OS=Mycobacterium leprae (strain Br4923) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.820e-50
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V  L+++   GKE  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T  DNQP V IQVY+GER     N LLG FEL+GIPPAPRGVPQI V FDIDANGI++V+A+DK  G++N I I    G LSK+EI++MV++AE
Sbjct:  314 GGSTRMPAVTDLVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIASHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQEGSG-LSKEEIDRMVKDAE 494
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_FRATT (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.820e-50
Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +++FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP KK QVFST  DNQP V I V +GER     N  LG+F+L+ IPPAPRG+PQI V FDIDANGILNVSA+DK  G++  I I +  G LS+++IEKMVQ+AE
Sbjct:  343 GGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDILLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAEDNQPAVTIHVLQGEREMASANKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQNIVIKSSSG-LSEEDIEKMVQDAE 522
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_FRAT1 (Chaperone protein dnaK OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.820e-50
Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +++FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP KK QVFST  DNQP V I V +GER     N  LG+F+L+ IPPAPRG+PQI V FDIDANGILNVSA+DK  G++  I I +  G LS+++IEKMVQ+AE
Sbjct:  343 GGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDILLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAEDNQPAVTIHVLQGEREMASANKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQNIVIKSSSG-LSEEDIEKMVQDAE 522
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BIFLO2.925e-5055.91Chaperone protein dnaK OS=Bifidobacterium longum G... [more]
DNAK_BIFLD2.925e-5055.91Chaperone protein dnaK OS=Bifidobacterium longum (... [more]
DNAK_BIFAA2.925e-5055.91Chaperone protein dnaK OS=Bifidobacterium adolesce... [more]
DNAK_ACIAC2.925e-5058.60Chaperone protein dnaK OS=Acidovorax avenae subsp.... [more]
DNAK_SOLUE3.820e-5056.45Chaperone protein dnaK OS=Solibacter usitatus (str... [more]
DNAK_RALEH3.820e-5056.99Chaperone protein dnaK OS=Ralstonia eutropha (stra... [more]
DNAK_MYCLE3.820e-5056.99Chaperone protein dnaK OS=Mycobacterium leprae GN=... [more]
DNAK_MYCLB3.820e-5056.99Chaperone protein dnaK OS=Mycobacterium leprae (st... [more]
DNAK_FRATT3.820e-5058.06Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRAT13.820e-5058.06Chaperone protein dnaK OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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