CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_FRATH (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.989e-50
Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +++FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP KK QVFST  DNQP V I V +GER     N  LG+F+L+ IPPAPRG+PQI V FDIDANGILNVSA+DK  G++  I I +  G LS+++IEKMVQ+AE
Sbjct:  343 GGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAEDNQPAVTIHVLQGEREMASANKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQNIVIKSSSG-LSEEDIEKMVQDAE 522
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_FRATF (Chaperone protein dnaK OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.989e-50
Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P VQ+ +++FF GKE  K  NPDE           +L+G+    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP KK QVFST  DNQP V I V +GER     N  LG+F+L+ IPPAPRG+PQI V FDIDANGILNVSA+DK  G++  I I +  G LS+++IEKMVQ+AE
Sbjct:  343 GGQTRMPLVQEKVKEFF-GKEPRKDVNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAEDNQPAVTIHVLQGEREMASANKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQNIVIKSSSG-LSEEDIEKMVQDAE 522
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BIFLI (Chaperone protein dnaK OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.989e-50
Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V+ L+++   GKE  +S NPDE           ++ G+     +D+LL+DVTP SLG+ET GG+MT LI RNT IP K+ +VFST  DNQP VLIQVY+GER   RDN  LG FEL+GI PAPRGVPQI V FDIDANGI++VSA+DK  G++  +TI    G L KDEI++MV+EAE
Sbjct:  319 GGSTRMPAVKDLVKELTGGKEANQSVNPDEVVAVGAAVQSGVIKGDR----KDVLLIDVTPLSLGIETKGGIMTKLIDRNTAIPTKRSEVFSTAEDNQPSVLIQVYQGEREFARDNKPLGTFELTGIAPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGSG-LPKDEIDRMVKEAE 499
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BART1 (Chaperone protein dnaK OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dnaK PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.989e-50
Identity = 107/186 (57.53%), Postives = 133/186 (71.51%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+QQ++Q+FF GK+  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER    DN LL +F+L GIPPAPRG+PQI V FDIDANGI+NVSA+DK  G++++I I    G LS  +IEKMV++AE
Sbjct:  336 GGMTRMPKIQQVVQNFF-GKDPHKGVNPDEVVAMGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTADDNQSAVTIRVFQGEREMASDNKLLAQFDLVGIPPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRI-QASGGLSDADIEKMVKDAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RICRS (Chaperone protein dnaK OS=Rickettsia rickettsii (strain Sheila Smith) GN=dnaK PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50
Identity = 107/186 (57.53%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ ++ FF G+E  K  NPDE           +L    N++V D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER   +DN LLG+F L GIPPAPRG+PQI V FDIDANGI++VSA+DK  G++ K+TI    G LS  EIE+MV++AE
Sbjct:  335 GGMTRMPKVQEAVKKFF-GREPHKGVNPDEVVALGAAIQGGVL----NKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGLPQIEVTFDIDANGIVHVSAKDKASGKEQKVTI-QASGGLSDAEIEQMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RICRO (Chaperone protein dnaK OS=Rickettsia rickettsii (strain Iowa) GN=dnaK PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50
Identity = 107/186 (57.53%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ ++ FF G+E  K  NPDE           +L    N++V D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER   +DN LLG+F L GIPPAPRG+PQI V FDIDANGI++VSA+DK  G++ K+TI    G LS  EIE+MV++AE
Sbjct:  335 GGMTRMPKVQEAVKKFF-GREPHKGVNPDEVVALGAAIQGGVL----NKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGLPQIEVTFDIDANGIVHVSAKDKASGKEQKVTI-QASGGLSDAEIEQMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RICBR (Chaperone protein dnaK OS=Rickettsia bellii (strain RML369-C) GN=dnaK PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50
Identity = 106/186 (56.99%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ ++ FF G+ L K  NPDE           +L    N++V D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER   +DN +LG+F L GIPPAPRGVPQI V FDIDANGI++VSA+DK  G++ ++TI    G LS  EIE+MV++AE
Sbjct:  335 GGMTRMPKVQEAVEKFF-GRALHKGVNPDEVVALGAAIQGGVL----NKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKMLGQFNLEGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKASGKEQRVTI-QASGGLSDAEIEQMVKDAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RALSO (Chaperone protein dnaK OS=Ralstonia solanacearum GN=dnaK PE=2 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ +++FF GKE  K  NPDE           +L G+     +D+LLLDVTP SLG+ET GGVMT +I +NTTIP K  Q FST  DNQP V I+VY+GER     N +LG+F L GIPPAPRG PQI V FDIDANGIL+V A+DK  G++NKITI    G LS+ EIE+MV++AE
Sbjct:  342 GGMTRMPKVQEKVKEFF-GKEARKDVNPDEAVAVGAAIQGQVLGGDR----KDVLLLDVTPLSLGIETLGGVMTKMIGKNTTIPTKFSQTFSTADDNQPAVTIKVYQGEREMASGNKMLGEFNLEGIPPAPRGTPQIEVSFDIDANGILHVGAKDKATGKENKITIKASSG-LSEAEIERMVKDAE 521
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCSS (Chaperone protein dnaK OS=Mycobacterium sp. (strain MCS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50
Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V +L+++   GKE  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T  DNQP V IQV++GER     N LLG FEL+GIPPAPRGVPQI V FDIDANGI++V+A+DK  G++N I I    G LSK+EI++M+++AE
Sbjct:  314 GGSTRMPAVSELVKEMTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVFQGEREIASHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSG-LSKEEIDRMIKDAE 494
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCSK (Chaperone protein dnaK OS=Mycobacterium sp. (strain KMS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50
Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V +L+++   GKE  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T  DNQP V IQV++GER     N LLG FEL+GIPPAPRGVPQI V FDIDANGI++V+A+DK  G++N I I    G LSK+EI++M+++AE
Sbjct:  314 GGSTRMPAVSELVKEMTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVFQGEREIASHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSG-LSKEEIDRMIKDAE 494
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_FRATH4.989e-5058.06Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_FRATF4.989e-5058.06Chaperone protein dnaK OS=Francisella tularensis s... [more]
DNAK_BIFLI4.989e-5055.91Chaperone protein dnaK OS=Bifidobacterium longum s... [more]
DNAK_BART14.989e-5057.53Chaperone protein dnaK OS=Bartonella tribocorum (s... [more]
DNAK_RICRS6.516e-5057.53Chaperone protein dnaK OS=Rickettsia rickettsii (s... [more]
DNAK_RICRO6.516e-5057.53Chaperone protein dnaK OS=Rickettsia rickettsii (s... [more]
DNAK_RICBR6.516e-5056.99Chaperone protein dnaK OS=Rickettsia bellii (strai... [more]
DNAK_RALSO6.516e-5056.99Chaperone protein dnaK OS=Ralstonia solanacearum G... [more]
DNAK_MYCSS6.516e-5055.91Chaperone protein dnaK OS=Mycobacterium sp. (strai... [more]
DNAK_MYCSK6.516e-5055.91Chaperone protein dnaK OS=Mycobacterium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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