CB304793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCSJ (Chaperone protein dnaK OS=Mycobacterium sp. (strain JLS) GN=dnaK PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50 Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+P V +L+++ GKE K NPDE +L GE V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T DNQP V IQV++GER N LLG FEL+GIPPAPRGVPQI V FDIDANGI++V+A+DK G++N I I G LSK+EI++M+++AE Sbjct: 314 GGSTRMPAVSELVKEMTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVFQGEREIASHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSG-LSKEEIDRMIKDAE 494
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCGI (Chaperone protein dnaK OS=Mycobacterium gilvum (strain PYR-GCK) GN=dnaK PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50 Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+P V +L+++ GKE K NPDE +L GE V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T DNQP V IQV++GER N LLG FEL+GIPPAPRGVPQI V FDIDANGI++V+A+DK G++N I I G LSK+EI++M+++AE Sbjct: 314 GGSTRMPAVSELVKEMTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVFQGEREIASHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQEGSG-LSKEEIDRMIKDAE 494
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MAGSA (Chaperone protein dnaK OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dnaK PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50 Identity = 105/186 (56.45%), Postives = 133/186 (71.51%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+PK+Q+++++FF G+E K NPDE +L GE V+D+LLLDVTP SLG+ET GGV T LI RNTTIP +K QVFST DNQ V I+V++GER DN +LG+F+L GIPPAPRGVPQ+ V FDIDANG++NVSA+DK G++ +I I G LS +IEKMV+EAE Sbjct: 336 GGMTRMPKIQEVVKEFF-GREPHKGVNPDEVVAIGAAIQGGVLKGE----VKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTRKSQVFSTAEDNQTAVTIRVFQGEREMAADNKVLGQFDLVGIPPAPRGVPQVEVTFDIDANGLVNVSAKDKATGKEQQIRI-QASGGLSDADIEKMVKEAE 515
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_FRATM (Chaperone protein dnaK OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=dnaK PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.516e-50 Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+P VQ+ +++FF GKE K NPDE +L+G+ V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP KK QVFST DNQP V I V +GER N LG+F+L+ IPPAPRG+PQI V FDIDANGILNVSA+DK G++ I I + G LS+++IEKMVQ+AE Sbjct: 343 GGQTRMPLVQEKVKEFF-GKEPRKDMNPDEAVAVGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETMGGVMTKLIERNTTIPTKKSQVFSTAEDNQPAVTIHVLQGEREMASANKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQNIVIKSSSG-LSEEDIEKMVQDAE 522
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7M_PHAVU (Heat shock 70 kDa protein, mitochondrial OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.510e-50 Identity = 108/186 (58.06%), Postives = 132/186 (70.97%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+PKVQ+++ + F GK K NPDE IL G+ V++LLLLDVTP SLG+ET GG+ T LI RNTTIP KK QVFST DNQ V I+V +GER DN +LG+F+L GIPPAPRG+PQI V FDIDANGI+ VSA+DK+ G++ +ITI G LS+DEIEKMV+EAE Sbjct: 384 GGMTRVPKVQEVVLNIF-GKSPSKGVNPDEAVAMGAAIQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITI-RSSGGLSEDEIEKMVKEAE 563
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_RALPJ (Chaperone protein dnaK OS=Ralstonia pickettii (strain 12J) GN=dnaK PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.510e-50 Identity = 106/186 (56.99%), Postives = 129/186 (69.35%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+PKVQ+ +++FF GKE K NPDE +L G+ D+LLLDVTP SLG+ET GGVMT +I +NTTIP K Q FST DNQP V I+VY+GER N +LG+F L GIPPAPRG PQI V FDIDANGIL+V A+DK G++NKITI G LS+ EIE+MV++AE Sbjct: 342 GGMTRMPKVQEKVKEFF-GKEARKDVNPDEAVAVGAAIQGQVLGGDRT----DVLLLDVTPLSLGIETLGGVMTKMIGKNTTIPTKFSQTFSTADDNQPAVTIKVYQGEREMASGNKMLGEFNLEGIPPAPRGTPQIEVSFDIDANGILHVGAKDKATGKENKITIKASSG-LSEAEIERMVKDAE 521
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_NOCFA (Chaperone protein dnaK OS=Nocardia farcinica GN=dnaK PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.510e-50 Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+P V L+++ GKE K NPDE +L GE V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T DNQP V IQV++GER N LLG FEL+GIPPAPRGVPQI V FDIDANGI++V+A+DK G++N I I + G LSK+EI++M+++AE Sbjct: 314 GGSTRMPAVSDLVRELTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVFQGEREIAAHNKLLGSFELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQDGSG-LSKEEIDRMIKDAE 494
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCUA (Chaperone protein dnaK OS=Mycobacterium ulcerans (strain Agy99) GN=dnaK PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.510e-50 Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+P V +L+++ GKE K NPDE +L GE V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T DNQP V IQVY+GER N LLG FEL+GIPPAPRGV QI V FDIDANGI++V+A+DK G++N I I G LSKDEI++M+++AE Sbjct: 314 GGSTRMPAVTELVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIAAHNKLLGSFELTGIPPAPRGVSQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSG-LSKDEIDRMIKDAE 494
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_METI4 (Chaperone protein dnaK OS=Methylacidiphilum infernorum (isolate V4) GN=dnaK PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.510e-50 Identity = 105/186 (56.45%), Postives = 131/186 (70.43%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+PK+ ++ + G+E K NPDE A+L G+ V+D+LLLDVTP +L +ETAGG+ T +IPRNTTIP +K Q+FST+ DNQP V I+V +GER RDN LLG F L GIPPAPRGVPQI V FDIDANGIL+VSA+D G++ KITI G LSK+EIE+M +EAE Sbjct: 338 GGMTRMPKIIEIARKLI-GREPHKGVNPDEVVAVGAAIQGAVLKGQ----VKDVLLLDVTPLTLSIETAGGIATPMIPRNTTIPTRKSQIFSTFSDNQPSVEIKVLQGERPMARDNKLLGVFHLDGIPPAPRGVPQIEVTFDIDANGILHVSAKDLGTGREQKITITGSSG-LSKEEIERMTKEAE 517
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_JANMA (Chaperone protein dnaK OS=Janthinobacterium sp. (strain Marseille) GN=dnaK PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.111e-49 Identity = 106/186 (56.99%), Postives = 133/186 (71.51%), Query Frame = -1 Query: 28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585 GG TR+PKVQ+ ++DFF GK+ K NPDE ++LSG+ +DLLLLDVTP SLG+ET GGVMT +I +NTTIP K QVFST DNQP V I+V++GER N LG+F L GIPP+ RG PQI V FDIDANGIL+V A+DK G++NKITI + G L+++EI+KMVQ+AE Sbjct: 342 GGMTRMPKVQETVKDFF-GKDPRKDVNPDEAVAVGAAIQGSVLSGDR----KDLLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTKFSQVFSTADDNQPAVTIKVFQGEREMAVGNKALGEFNLEGIPPSARGTPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSG-LTEEEIQKMVQDAE 521 The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bpback to top |