CB304793

Overview
NameCB304793
Unique NameCB304793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.111e-49
Identity = 107/186 (57.53%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+Q+++Q FF GK+  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK QVFST  DNQ  V I+V++GER    DN LL +F+L GIPPAPRGVPQI V FDIDANGI+NVSA+DK  G++++I I    G LS  +IEKMV++AE
Sbjct:  336 GGMTRMPKIQEVVQSFF-GKDPHKGVNPDEVVAMGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTADDNQNAVTIRVFQGEREMANDNKLLAQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRI-QASGGLSDADIEKMVKDAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: HSP7M_PEA (Heat shock 70 kDa protein, mitochondrial OS=Pisum sativum GN=HSP1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49
Identity = 108/186 (58.06%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQQ++ + F GK   K  NPDE           IL G+    V++LLLLDVTP SLG+ET GG+ T LI RNTTIP KK QVFST  DNQ  V I+V +GER    DN  LG+F+L GIPPAPRG+PQI V FDIDANGI+ VSA+DK+ G++ +ITI    G LS DEI+KMV+EAE
Sbjct:  385 GGMTRVPKVQQVVSEIF-GKSPSKGVNPDEAVAMGAALQGGILRGD----VKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKSLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITI-RSSGGLSDDEIDKMVKEAE 564
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PORUM (Chaperone protein dnaK OS=Porphyra umbilicalis GN=dnaK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49
Identity = 106/186 (56.99%), Postives = 131/186 (70.43%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIP +QQ+++    GK+  +S NPDE           +L+GE    V+D+LLLDVTP SLG+ET GGVMT +IPRNTTIP KK +VFST  DNQP V IQV +GER  T+DN  LG F L GI PAPRGVPQI V FDIDANGIL+V A++K  G++  ITI+     L KD++E+MV+EAE
Sbjct:  334 GGSTRIPAIQQMVKRLI-GKDPNQSVNPDEVVAIGAAVQAGVLAGE----VKDILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQPNVEIQVLQGERELTKDNKSLGTFRLDGIMPAPRGVPQIEVTFDIDANGILSVKAKEKATGKEQSITISG-ASTLPKDDVERMVKEAE 513
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PORPU (Chaperone protein dnaK OS=Porphyra purpurea GN=dnaK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49
Identity = 106/186 (56.99%), Postives = 131/186 (70.43%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIP +QQ+++    GK+  +S NPDE           +L+GE    V+D+LLLDVTP SLG+ET GGVMT +IPRNTTIP KK +VFST  DNQP V IQV +GER  T+DN  LG F L GI PAPRGVPQI V FDIDANGIL+V A++K  G++  ITI+     L KD++E+MV+EAE
Sbjct:  334 GGSTRIPAIQQMVKRLI-GKDPNQSVNPDEVVAIGAAVQAGVLAGE----VKDILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQPNVEIQVLQGERELTKDNKSLGTFRLDGIMPAPRGVPQIEVTFDIDANGILSVKAKEKATGKEQSITISG-ASTLPKDDVERMVKEAE 513
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_PORHA (Chaperone protein dnaK OS=Porphyra haitanensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49
Identity = 106/186 (56.99%), Postives = 131/186 (70.43%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TRIP +QQ+++    GK+  +S NPDE           +L+GE    V+D+LLLDVTP SLG+ET GGVMT +IPRNTTIP KK +VFST  DNQP V IQV +GER  T+DN  LG F L GI PAPRGVPQI V FDIDANGIL+V A++K  G++  ITI+     L KD++E+MV+EAE
Sbjct:  335 GGSTRIPAIQQMVKRLI-GKDPNQSVNPDEVVAIGAAVQAGVLAGE----VKDILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQPNVEIQVLQGERELTKDNKSLGTFRLDGIMPAPRGVPQIEVTFDIDANGILSVKAKEKATGKEQSITISG-ASTLPKDDVERMVKEAE 514
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BRUO2 (Chaperone protein dnaK OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dnaK PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49
Identity = 107/186 (57.53%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+Q++++ FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK Q FST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRGVPQI V FDIDANGI+NVSA+DK  G++++I I    G LS  +IEKMV++AE
Sbjct:  336 GGMTRMPKIQEVVKAFF-GKEPHKGVNPDEVVAMGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQSAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRI-QASGGLSDADIEKMVKDAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BRUME (Chaperone protein dnaK OS=Brucella melitensis GN=dnaK PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49
Identity = 107/186 (57.53%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+Q++++ FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK Q FST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRGVPQI V FDIDANGI+NVSA+DK  G++++I I    G LS  +IEKMV++AE
Sbjct:  336 GGMTRMPKIQEVVKAFF-GKEPHKGVNPDEVVAMGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQSAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRI-QASGGLSDADIEKMVKDAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BRUAB (Chaperone protein dnaK OS=Brucella abortus GN=dnaK PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49
Identity = 107/186 (57.53%), Postives = 132/186 (70.97%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PK+Q++++ FF GKE  K  NPDE           +L G+    V+D+LLLDVTP SLG+ET GGV T LI RNTTIP KK Q FST  DNQ  V I+V++GER    DN LLG+F+L GIPPAPRGVPQI V FDIDANGI+NVSA+DK  G++++I I    G LS  +IEKMV++AE
Sbjct:  336 GGMTRMPKIQEVVKAFF-GKEPHKGVNPDEVVAMGAAIQGGVLQGD----VKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQSAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRI-QASGGLSDADIEKMVKDAE 515
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_BORA1 (Chaperone protein dnaK OS=Bordetella avium (strain 197N) GN=dnaK PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49
Identity = 105/186 (56.45%), Postives = 135/186 (72.58%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+PKVQ+ +++FF G+E  K  NPDE          ++LSG+     +D+LLLDVTP SLG+ET GGVMT +I +NTTIP +  Q FST  DNQP V I+V++GER     N  LG+F L GIPPAPRG+PQI V FDIDANGIL+VSA+DK  G++NKITI  + G LS+DEI++MV++AE
Sbjct:  342 GGMTRMPKVQEKVKEFF-GREPRKDVNPDEAVAAGAAIQGSVLSGDR----KDVLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTRFSQTFSTADDNQPAVTIKVFQGEREIAAGNKALGEFNLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVKDAE 521
[Close]
BLAST of CB304793 vs. ExPASy Swiss-Prot
Match: DNAK_MYCTU (Chaperone protein dnaK OS=Mycobacterium tuberculosis GN=dnaK PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 1.896e-49
Identity = 103/186 (55.38%), Postives = 130/186 (69.89%), Query Frame = -1 
Query:   28 GGFTRIPKVQQLLQDFFNGKELCKSTNPDEXXXXXXXXXXAILSGEGNEKVQDLLLLDVTPFSLGLETAGGVMTVLIPRNTTIPPKKEQVFSTYFDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTPGQKNKITIANDKGRLSKDEIEKMVQEAE 585
            GG TR+P V  L+++   GKE  K  NPDE           +L GE    V+D+LLLDVTP SLG+ET GGVMT LI RNTTIP K+ + F+T  DNQP V IQVY+GER     N LLG FEL+GIPPAPRG+PQI V FDIDANGI++V+A+DK  G++N I I    G LSK++I++M+++AE
Sbjct:  314 GGSTRMPAVTDLVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKGE----VKDVLLLDVTPLSLGIETKGGVMTRLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIAAHNKLLGSFELTGIPPAPRGIPQIEVTFDIDANGIVHVTAKDKGTGKENTIRIQEGSG-LSKEDIDRMIKDAE 494
The following BLAST results are available for this feature:
BLAST of CB304793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BARQU1.111e-4957.53Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
HSP7M_PEA1.452e-4958.06Heat shock 70 kDa protein, mitochondrial OS=Pisum ... [more]
DNAK_PORUM1.452e-4956.99Chaperone protein dnaK OS=Porphyra umbilicalis GN=... [more]
DNAK_PORPU1.452e-4956.99Chaperone protein dnaK OS=Porphyra purpurea GN=dna... [more]
DNAK_PORHA1.452e-4956.99Chaperone protein dnaK OS=Porphyra haitanensis GN=... [more]
DNAK_BRUO21.452e-4957.53Chaperone protein dnaK OS=Brucella ovis (strain AT... [more]
DNAK_BRUME1.452e-4957.53Chaperone protein dnaK OS=Brucella melitensis GN=d... [more]
DNAK_BRUAB1.452e-4957.53Chaperone protein dnaK OS=Brucella abortus GN=dnaK... [more]
DNAK_BORA11.452e-4956.45Chaperone protein dnaK OS=Bordetella avium (strain... [more]
DNAK_MYCTU1.896e-4955.38Chaperone protein dnaK OS=Mycobacterium tuberculos... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_A03 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_A03 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304793 ID=CB304793; Name=CB304793; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGCCTCTTGAACCATCTTCT
CAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGCGATGGTGATCTTG
TTCTTTTGACCAGGGGTCTTGTCCTCGGCAGACACATTCAGGATACCATT
GGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGAGCTG
GGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCTGGTT
CTTGTCCTTTCACCTTCATAAACTTGGATCAACACACCAGGTTGGTTGTC
AAAGTAAGTTGAAAAAACCTGCTCCTTCTTGGGGGGAATGGTCGTGTTCC
TTGGAATCAACACAGTCATGACACCACCAGCAGTCTCCAAACCAAGGGAG
AAAGGCGTGACATCCAATAGCAAAAGATCCTGCACCTTCTCATTACCCTC
ACCACTCAAGATAGCAGCTTGCACAGCAGCACCATAGGCAACAGCCTCAT
CGGGGTTGGTGCTCTTGCAAAGCTCCTTCCCATTAAAGAAATCTTGCAAA
AGCTGCTGGACTTTGGGAATCCTAGTAAATCCTCC
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