CB304826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.990e-18 Identity = 54/123 (43.90%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY AG AIG D LN+PE VA D V+SFKTALWFWMT H V+ G+ ING ECG D+V +R+ Y YC G+ GS L+C Sbjct: 198 RGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 4.990e-18 Identity = 51/123 (41.46%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY AGRAIG D L++P+ VA D +SFKTALWFWMT H V+ G+ +NG ECG D+V +R+ Y YC FG+ G L+C Sbjct: 201 RGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC 323
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.517e-18 Identity = 51/123 (41.46%), Postives = 65/123 (52.85%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY AG AIG + LN+P+ VA D V+SFKTALWFWMT H V+ GF ING EC + + +R+ Y YC+ GVDPG+ L+C Sbjct: 117 RGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDC 239
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.112e-17 Identity = 51/123 (41.46%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLNQ---------------GFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY + GRAIG D LN P+ VA D VISFK+ALWFWMT H V+ G+ ING ECG +V DR+ + YC GV G+ L+C Sbjct: 187 RGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 309
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.112e-17 Identity = 51/123 (41.46%), Postives = 62/123 (50.41%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSVLNQ------GFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQLT NY +AG AIG + +N+P+ VA D ISFKTA+WFWMT + S +Q G+ ING ECG D V DR+ Y YC V PG L+C Sbjct: 122 RGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDC 244
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.112e-17 Identity = 53/123 (43.09%), Postives = 62/123 (50.41%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY AGRAIG D L +P+ VA D +SFKTALWFWMT H+V+ GF ING ECG +V DR+ Y YC GV G L+C Sbjct: 137 RGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.112e-17 Identity = 51/123 (41.46%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLNQ---------------GFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY + GRAIG D LN P+ VA D VISFK+ALWFWMT H V+ G+ ING ECG +V DR+ + YC GV G+ L+C Sbjct: 186 RGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 308
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.112e-17 Identity = 50/123 (40.65%), Postives = 65/123 (52.85%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+QL+ N NY + GRAIG D LN+P+ V+ D VI+FK A+WFWMT H+V+ G+ ING ECG +V DR+ Y YC GV+PG L+C Sbjct: 183 RGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDC 305
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.452e-17 Identity = 51/123 (41.46%), Postives = 66/123 (53.66%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQLT N NY AG+AI D +N+P+ ++ + +SFKTA+WFWMT H V+ G+ ING ECG ++V DRV Y YC+ FGVDPG L+C Sbjct: 191 RGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDC 313
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.896e-17 Identity = 49/123 (39.84%), Postives = 61/123 (49.59%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQLTG NY AG A+G D + +P+ V+ D V+SFKTA+WFWMT H V+ G+ ING ECG D +DR+ Y YC G GS L+C Sbjct: 131 RGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDC 253 The following BLAST results are available for this feature:
BLAST of CB304826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304826 ID=CB304826; Name=CB304826; organism=Citrus sinensis; type=EST; length=467bpback to top |