CB304861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.825e-16 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = -2 Query: 301 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQK 588 FGS + +K + A GSGW WL ++ +L + +T NQD + + T P+LG+DVWEHAYYL Y+N +PDY+ WNV+NW + Y + Sbjct: 109 FGSFDQFKEKFADAAANRFGSGWAWLVVNDG--KLEITSTPNQDTPLMEGKT--PILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVAKRYNE 200
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.302e-16 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = -2 Query: 328 GSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 585 G E + + + GSGW WL + T K++VVE+TANQD + + T P+LG+DVWEHAYYL+Y+N +PDY+ +NV+NW Sbjct: 109 GGFEKFKEAFTKAALSRFGSGWAWLSV-TPDKKVVVESTANQDSPLFEGNT--PILGLDVWEHAYYLKYQNRRPDYIGAFYNVVNW 191
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.302e-16 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = -2 Query: 328 GSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 585 G E + + + GSGW WL + T K++VVE+TANQD + + T P+LG+DVWEHAYYL+Y+N +PDY+ +NV+NW Sbjct: 109 GGFEKFKEAFTKAALSRFGSGWAWLSV-TPDKKVVVESTANQDSPLFEGNT--PILGLDVWEHAYYLKYQNRRPDYIGAFYNVVNW 191
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_MYCSM (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=4) HSP 1 Score: 83.9593 bits (206), Expect = 6.302e-16 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 328 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 588 FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 103 FGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_MYCS2 (Superoxide dismutase [Mn] OS=Mycobacterium smegmatis GN=sodA PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.302e-16 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = -2 Query: 328 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 588 FGS + + +A LQGSGW LG D+ RL+ +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 103 FGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGGRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 6.302e-16 Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 301 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQK 588 FGS A + S A GSGW WL ++ L + +T NQD + + T P+LG+DVWEHAYYL+Y+N +P+Y+ WNV+NW + Y + Sbjct: 109 FGSFTAFKDEFSKAAAGRFGSGWAWLVVNNG--ELEITSTPNQDSPIMEGKT--PILGLDVWEHAYYLKYQNRRPEYIAAFWNVVNWDEVAKRYSE 200
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 6.302e-16 Identity = 42/94 (44.68%), Postives = 55/94 (58.51%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS E ++ + G L GSGWVWL D K L +E N V K L PLLG DVWEHAYYL Y+N + D+LK++W++++W Y Sbjct: 101 FGSFEKFKEEFNTAGTTLFGSGWVWLASDANGK-LSIEKEPNAGNPVRKG--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIVDWDIVESRY 191
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 8.231e-16 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 301 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQK 588 FGS A + S A GSGW WL ++ L + +T NQD + + T P+LG+DVWEHAYYL+Y+N +P+Y+ WN++NW + Y + Sbjct: 109 FGSFTAFKDEFSKAAAGRFGSGWAWLVVNNG--ELEITSTPNQDSPIMEGKT--PILGLDVWEHAYYLKYQNRRPEYIAAFWNIVNWDEVAKRYSE 200
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = -2 Query: 325 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWK 588 FGS +A Q+ + G GSGWVWL + ++ L + +T NQD + + T P++G DVWEHAYYL+Y+N +P+YL WNV+NW+ Sbjct: 109 FGSFDAFKQQFNDAGTKRFGSGWVWL-VRSQQGDLQILSTPNQDSPLIEGHT--PIMGNDVWEHAYYLKYQNRRPEYLNAWWNVLNWE 193
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM3_PLEBO (Superoxide dismutase [Mn] 3 (Fragment) OS=Plectonema boryanum GN=sodA3 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.834e-15 Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FG+ E+ ++ + G GSGWVWL + + +L + +TANQD + + P++G DVWEHAYYL+Y+N + DYL N WNV+NW + +Q Sbjct: 139 FGNFESFRKQFNEAGGDRFGSGWVWLVRNAQ-GQLQIVSTANQDNPIMEGN--YPIMGNDVWEHAYYLRYQNRRADYLNNWWNVVNWNEINRRFQ 230 The following BLAST results are available for this feature:
BLAST of CB304861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304861 ID=CB304861; Name=CB304861; organism=Citrus sinensis; type=EST; length=592bpback to top |