CB304861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_BUCAI (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=sodA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.395e-15 Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = -2 Query: 301 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQK 588 FG+++ +K + GSGWVWL +V +T NQD PL+ K + P++G+D+WEHAYYL+Y+N + DY+K+ WNV+NW+ AS+ QK Sbjct: 106 FGTIDEFKEKFESVALNHFGSGWVWLVNQNGVLSIV--STVNQDSPLMGKLISNTYGYPIIGLDIWEHAYYLKYQNRRLDYIKSFWNVVNWEEASNRLQK 203
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODB_ASPNG (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus niger GN=sodB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15 Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 +GS++ A +QGSGW WL + L + TT +QDP+ +P+ G+D+WEHAYYLQY N K Y++N+W V+NW+ A Y Sbjct: 109 WGSVKNFTDAFEAVLLGIQGSGWGWLVSSGKTGFLEIVTTKDQDPVTGP----IPVFGVDMWEHAYYLQYLNNKASYVQNIWKVINWEEAEHRY 198
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_MYCTU (Superoxide dismutase [Fe] OS=Mycobacterium tuberculosis GN=sodB PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = -2 Query: 328 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 588 FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA+YLQYKNVK D+ K WNV+NW Sbjct: 103 FGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNW 187
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_MYCBO (Superoxide dismutase [Fe] OS=Mycobacterium bovis GN=sodB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = -2 Query: 328 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 588 FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA+YLQYKNVK D+ K WNV+NW Sbjct: 103 FGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNW 187
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_MYCKA (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium kansasii GN=sodA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.027e-14 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = -2 Query: 328 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 588 FGS + + A +QGSGW LG DT +L++ + T P ++PLL +D+WEHA+YLQYKNVK D+ K WNV+NW Sbjct: 77 FGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIIPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNW 161
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_PROFR (Superoxide dismutase [Mn/Fe] OS=Propionibacterium freudenreichii subsp. shermanii GN=sodA PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14 Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = -2 Query: 328 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNW 588 FGS + + + +A +QGSGW L D KR + T D +PLL +D+WEHA+YLQYKNVK DY+K+ WNV+NW Sbjct: 104 FGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKR--INTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNW 188
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_HELPY (Superoxide dismutase [Fe] OS=Helicobacter pylori GN=sodB PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL-VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGSLE + L GSGW W + + +++ +++T+ Q P+ K VPLL +DVWEHAYY+ +KN +P YL+ + +NW + S Y+ Sbjct: 99 FGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKK---VPLLVVDVWEHAYYIDHKNARPVYLEKFYGHINWHFVSQCYE 191
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_HELPJ (Superoxide dismutase [Fe] OS=Helicobacter pylori J99 GN=sodB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRL-VVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGSLE + L GSGW W + + +++ +++T+ Q P+ K VPLL +DVWEHAYY+ +KN +P YL+ + +NW + S Y+ Sbjct: 99 FGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKK---VPLLVVDVWEHAYYIDHKNARPVYLEKFYGHVNWHFVSQCYE 191
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_SALTY (Superoxide dismutase [Fe] OS=Salmonella typhimurium GN=sodB PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = -2 Query: 316 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYAS 588 FGS + + GSGW WL + K +V T+ PL T A PLL +DVWEHAYY+ Y+N +P+YL++ W ++NW++ + Sbjct: 101 FGSFAEFKAQFTDAAIKNFGSGWTWLVKSADGKLAIVSTSNAGTPLTTDA---TPLLTVDVWEHAYYIDYRNARPNYLEHFWALVNWEFVA 188
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_SALTI (Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = -2 Query: 316 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYAS 588 FGS + + GSGW WL + K +V T+ PL T A PLL +DVWEHAYY+ Y+N +P+YL++ W ++NW++ + Sbjct: 101 FGSFAEFKAQFTDAAIKNFGSGWTWLVKSADGKLAIVSTSNAGTPLTTDA---TPLLTVDVWEHAYYIDYRNARPNYLEHFWALVNWEFVA 188 The following BLAST results are available for this feature:
BLAST of CB304861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304861 ID=CB304861; Name=CB304861; organism=Citrus sinensis; type=EST; length=592bpback to top |