CB304861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM1_PLEBO (Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.663e-19 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS +A Q+ + GA GSGW WL D + K L + +TANQD + P P+LG DVWEHAYYL+Y+N + +YL N WNV+NW+ + Y Sbjct: 150 FGSFDAFKQQFNKAGADRFGSGWAWLVSDRQGK-LSITSTANQDNPLMSNPNAYPILGNDVWEHAYYLKYQNRRAEYLTNWWNVVNWQAVNQRY 242
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODF_TETPY (Superoxide dismutase [Fe] OS=Tetrahymena pyriformis PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.663e-19 Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 +GS E I + AA+QGSGW WLG DT K L + NQD + + ++VPLL IDVWEHAYYL Y+N++P YL VW ++NW+ Y Sbjct: 100 WGSYENFITLFNTRTAAIQGSGWGWLGYDTVSKSLRLFELGNQD--MPEWSSIVPLLTIDVWEHAYYLDYQNLRPKYLTEVWKIVNWREVEKRY 191
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.090e-19 Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTL---VPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FGS++ + K +A A GSGW WL + + L +++T NQD PL+T P + +PLLG+DVWEHAYYL+Y+N +P+Y+ WNV+NW+ ++ Y+ Sbjct: 112 FGSVDEMKAKFNAAAAGRFGSGWAWLSVKPDGS-LSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWNVVNWEQVAENYK 209
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.953e-19 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 +GSL+A ++ + + AA GSGW WL ++ L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 106 WGSLDAFKEEFADKAAARFGSGWAWLVVNNG--NLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELY 195
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 7.953e-19 Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = -2 Query: 298 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQKE 588 FGS++A + A GSGW WL L E K VV T +PL+ K PLLG+DVWEHAYYL+++N +PDY+K WNV+NW + ++ ++++ Sbjct: 108 FGSVDAFKAEFEKAAATRFGSGWAWLVLTAEGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDFVAERFEQK 207
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.039e-18 Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 +GSL+ + + + A GSGW WL +D + K L + +T NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW ++Y+ Sbjct: 106 WGSLDKFKDEFAKKAAGQFGSGWAWLVVDKDGK-LEIVSTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYIDAFWNVVNWNKVDELYE 197
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.039e-18 Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 298 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQKE 588 FGS+EA + A GSGW WL L E +L V +TANQD P++ KA PLLG+DVWEHAYYL+++N +PDY+K W+V+NW + ++ ++K+ Sbjct: 107 FGSVEAFQAEFEKAAATRFGSGWAWLVLQ-ENGKLAVVSTANQDSPVMGKAIAGCEGYPLLGLDVWEHAYYLKFQNRRPDYIKEFWHVVNWDFVAERFEKK 206
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18 Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = -2 Query: 304 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQ 588 FG AL +K++ GSGW WL D F +L V +TANQD V P++GIDVWEHAYYL+Y+N + DYL+ +WNV+NW A ++Y+ Sbjct: 111 FGGFAALKEKLTQAAMGRFGSGWAWLVKDP-FGKLHVISTANQDNPVMGG--FAPIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEIYK 202
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_STAES (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sodA PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18 Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 106 WGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_STAEQ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sodA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18 Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ +++Y Sbjct: 106 WGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYINAFWNVVNWEKVNELY 195 The following BLAST results are available for this feature:
BLAST of CB304861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304861 ID=CB304861; Name=CB304861; organism=Citrus sinensis; type=EST; length=592bpback to top |