CB304883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.856e-25 Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = -3 Query: 223 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 498 AITCGQV ++ PC+ + R GG P CC+GVRSL AA TT DR+ ACNCLK A R I G+NA AA +P +CGVS+PY IS + DCSRV Sbjct: 25 AITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.856e-25 Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = -3 Query: 223 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 498 AI+CGQV +++PC+++ R GG P CC+GVRSLN AA TT DR+ ACNCLK SI G+NA AA +P +CGVSIPY ISP+ DCS V Sbjct: 26 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.856e-25 Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = -3 Query: 223 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 498 AI+CGQV +++PC+++ R GG P CC+GVRSLN AA TT DR+ ACNCLK SI G+NA AA +P +CGVSIPY ISP+ DCS V Sbjct: 27 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 4.134e-25 Identity = 52/97 (53.61%), Postives = 66/97 (68.04%), Query Frame = -3 Query: 223 APVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 513 AP +A+TCGQV LAPCI + P CC+GVR+LN AA TT DRQ C CLKQ ++ G+ ++ AG+P +CGV+IPY ISP+TDCSRV Sbjct: 22 APAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.134e-25 Identity = 55/98 (56.12%), Postives = 68/98 (69.39%), Query Frame = -3 Query: 220 APVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 513 AP +++CG+VT LAPC+ +L GR P CC GV+ L GAA+T DR+ AC CLK A SI GI+ AAGLP CGV+IPYKISP+TDCS V+ Sbjct: 19 APHAESLSCGEVTSGLAPCLPYLE--GRGPLGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.051e-25 Identity = 52/94 (55.32%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 220 NAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 501 +AITCGQV L C+ + R GG PP CC GVR+LN A+TTPDRQ ACNCLK G+NA + AG+P +CGV+IPY I TDC++VR Sbjct: 21 SAITCGQVDSDLTSCLGYARKGGVIPPG-CCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.051e-25 Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = -3 Query: 220 APVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 513 AP A++CGQV LAPC+ +L+ GR P CC GV+ L GAA++ DR+ AC CLK A +I GI+ AAGLP CGV+IPYKISP+TDCS+V+ Sbjct: 19 APHAEALSCGQVQSGLAPCLPYLQ--GRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.571e-24 Identity = 53/100 (53.00%), Postives = 74/100 (74.00%), Query Frame = -3 Query: 220 PVTN--AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSI-PGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 510 P+T+ A++CG V +LA CI ++ GG PP CC+GV++LN A+TTPDRQ ACNC++ A R++ G+NA AAG+P+ CGV+IPYKIS +T+C VR Sbjct: 20 PITSNAALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.571e-24 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = -3 Query: 220 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 498 AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC C+K A G+NA AAG+P CGVS+PY IS + DCS++R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304883 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.052e-24 Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = -3 Query: 220 PVTN--AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 510 P+T+ A++CG V+G +APCI +L P CC+GV SLN ARTTPDRQ AC CL A ++P IN AAGLP+ CGV+IPYKIS T+C+ V+ Sbjct: 20 PITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118 The following BLAST results are available for this feature:
BLAST of CB304883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304883 ID=CB304883; Name=CB304883; organism=Citrus sinensis; type=EST; length=515bpback to top |