CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_ACIC1 (50S ribosomal protein L14 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=rplN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGA+ + I V G GR A +GD+++ATVK P K V+ AV+VR K RR DG ++ F++NA V++ G+ +G+ I GP+G+E Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----AGIGDVIIATVKDALPGAGVKKGDVVKAVVVRTAKERRRPDGSYIKFDENAAVLIKDGGDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_RHDSA (50S ribosomal protein L14, chloroplastic OS=Rhodomonas salina GN=rpl14 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GAK + I + G + A +GD+++ VK P++ R V+ AV++R +K RR+DG+ + F+DNA VI+N + +G+ + GPI +E D Sbjct: 8 LNVADNSGAKKIMCIRILGGNKKY-----ASIGDVIIGVVKDATPNMPVKRADVVRAVVMRTKKTVRRQDGMSIRFDDNAAVIINKENNPRGTRVFGPIARELRD 107
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_OLTVI (50S ribosomal protein L14, chloroplastic OS=Oltmannsiellopsis viridis GN=rpl14 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 VN ADN+GA+ L I V + SA +GD ++A VK+ P++ K ++ AVIVR K RR DG + F+DNA V++N +G +G+ + GP+ +E Sbjct: 8 VNVADNSGARKLMCIRVLDASFK----QSANIGDTIIAVVKEAIPNMPLKKSDIVRAVIVRSAKGIRRPDGTIIRFDDNAAVVINKEGNPRGTRVFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_MESVI (50S ribosomal protein L14, chloroplastic OS=Mesostigma viride GN=rpl14 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GAK + I V G R A +GD+++ VK P++ + +V+ AV+VR K RR++G+ + F+DNA V++N G KG+ + GP+ +E D Sbjct: 8 LNVADNSGAKKIMCIRVLGGSQR----KYAAIGDVIIGVVKDSVPNMSLKKSEVVRAVVVRTCKGIRRENGMTIRFDDNAAVVINKDGNPKGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_LOLPR (50S ribosomal protein L14, chloroplastic OS=Lolium perenne GN=rpl14 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E +L Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIVAVIKDALPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELREL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_HORVU (50S ribosomal protein L14, chloroplastic OS=Hordeum vulgare GN=rpl14 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E +L Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIVAVIKDALPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELREL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_AGRST (50S ribosomal protein L14, chloroplastic OS=Agrostis stolonifera GN=rpl14 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E +L Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIVAVIKDALPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELREL 110
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SYNY3 (50S ribosomal protein L14 OS=Synechocystis sp. (strain PCC 6803) GN=rplN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12 Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L + V G +GD ++A VK P++ + V+ AVIVR ++P RR G+ + F+DNA VI+N +G +G+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCLRVLGT----GNCTYGGIGDQIIAVVKDALPNMPIKKSDVVRAVIVRTKQPLRRASGMSIRFDDNAAVIINAEGNPRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SYNP2 (50S ribosomal protein L14 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12 Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L + V +GD ++A VK+ P++ K V+ AVIVR R+P RR G+ + F+DNA VI+N +G KG+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCLRVLST----GNCRYGGIGDQIIAVVKEAIPNMGVKKSDVVRAVIVRTRQPLRRASGMSIRFDDNAAVIINAEGNPKGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_PELTS (50S ribosomal protein L14 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rplN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12 Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 236 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 559 + V + +N ADNTGA+ L I V G G L R S VGD+++ +VK+ P + V+ AV+VR +K RR DG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 2 IQVQSILNVADNTGARRLMCIRVLG--GALRRYAS--VGDIIVCSVKEATPGGVVKKGDVVRAVVVRTKKEVRRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRD 108 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |