CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_DESAH (50S ribosomal protein L14 OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK LY I V G G R A +GD+++ +VK+ P+ + K V+ AVIVR +K R DG + F+DN+ VI+N E G+ I GP+ +E Sbjct: 11 ADNSGAKELYCIKVLG--GSKRRY--AGIGDVIVVSVKEAIPNAKVKKGDVVKAVIVRTKKEVSRPDGSMIRFDDNSAVIINASNEPIGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CYAA5 (50S ribosomal protein L14 OS=Cyanothece sp. (strain ATCC 51142) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L + V G +GD ++A VK P++ R ++ AVIVR R+P R G+ + F+DNA VI+N G +G+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCLRVLGT----GNCRYGEIGDKIVAVVKDALPNMPIKRSDIVTAVIVRTRQPVNRASGMSIRFDDNAAVIINADGNPRGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CORGL (50S ribosomal protein L14 OS=Corynebacterium glutamicum GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGA+ + I V G G R A +GD+++ATVK+ P K ++ AVIVR +K RR DG ++ F++NA VI+ E +G+ I GP+ +E Sbjct: 11 ADNTGAREILCIRVLG--GSTRRF--AGIGDVIVATVKEATPGGNVKSGEIVKAVIVRTKKETRRADGSYISFDENAAVIIKNDNEPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CORGB (50S ribosomal protein L14 OS=Corynebacterium glutamicum (strain R) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGA+ + I V G G R A +GD+++ATVK+ P K ++ AVIVR +K RR DG ++ F++NA VI+ E +G+ I GP+ +E Sbjct: 11 ADNTGAREILCIRVLG--GSTRRF--AGIGDVIVATVKEATPGGNVKSGEIVKAVIVRTKKETRRADGSYISFDENAAVIIKNDNEPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_COREF (50S ribosomal protein L14 OS=Corynebacterium efficiens GN=rplN PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGA+ + I V G G R A +GD+++ATVK+ P K ++ AVIVR +K RR DG ++ F++NA VI+ E +G+ I GP+ +E Sbjct: 11 ADNTGAREILCIRVLG--GSTRRF--AGIGDVIVATVKEAAPGGNVKSGEIVKAVIVRTKKETRRADGSYISFDENAAVIIKNDNEPRGTRIFGPVARE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_CHLMU (50S ribosomal protein L14 OS=Chlamydia muridarum GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + V G +R A VGD+++ +V+ +PD K V+ AVIVR R RRKDG + F+ N+ VI++ KG KG+ I GP+ +E D Sbjct: 11 ADNTGAKKVKCFKVLGG----SRRRYATVGDVIVCSVRDVEPDSSVKKGDVVKAVIVRTRNDIRRKDGSTLRFDTNSCVIIDDKGNPKGTRIFGPVAREIRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_TOBAC (50S ribosomal protein L14, chloroplastic OS=Nicotiana tabacum GN=rpl14 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E +L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELREL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_SOLTU (50S ribosomal protein L14, chloroplastic OS=Solanum tuberosum GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E +L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELREL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_SOLLC (50S ribosomal protein L14, chloroplastic OS=Solanum lycopersicum GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E +L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELREL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_SOLBU (50S ribosomal protein L14, chloroplastic OS=Solanum bulbocastanum GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 38/106 (35.85%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E +L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELREL 109 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |