CB304892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CUSOB (50S ribosomal protein L14, plastid OS=Cuscuta obtusiflora GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ + I + G R A +GD+++A +K P++ + +V+ AVIVR RK +R +G+ + ++DNA VI++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARTIMCIRIIGSSNRRY----AHIGDIIVAVIKDAVPNMTLEKSEVVRAVIVRTRKELKRDNGIILRYDDNAAVIIDKEGNPKGTRIFGAIPRELRKL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_CUSGR (50S ribosomal protein L14, plastid OS=Cuscuta gronovii GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ + I + G R A +GD+++A +K P++ + +V+ AVIVR RK +R +G+ + ++DNA VI++ +G KG+ I G I +E L Sbjct: 8 LNVADNSGARKIMCIRIIGSSNRRY----AHIGDIIVAVIKDAVPNMTLEKSEVVRAVIVRTRKELKRDNGIILRYDDNAAVIIDKEGNPKGTRIFGAIPRELRKL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RK14_ATRBE (50S ribosomal protein L14, chloroplastic OS=Atropa belladonna GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 37/106 (34.91%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 233 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECADL 541 +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +++ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E +L Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNMPLERSEIVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELREL 109
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_WOLSU (50S ribosomal protein L14 OS=Wolinella succinogenes GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADN+GAK + I V G G R A VGD+++A+VKK P+ + K V+ AV+VR +K +R +G + F+DNA VI++ K E G+ I GP+G+E Sbjct: 11 ADNSGAKEVMCIKVLG--GSKRRY--ATVGDVIIASVKKALPNGKIKKGQVVKAVVVRTKKEVQRDNGSLIRFDDNAAVILDNKREPVGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_THETN (50S ribosomal protein L14 OS=Thermoanaerobacter tengcongensis GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + I + G R + VGD+++A+VK P + +V+ AVIVR +K RKDG ++ F+DNA VI+ + +G+ I GP+ +E D Sbjct: 11 ADNTGAKEIMCIRLLGGSNR----KYSNVGDIIVASVKSATPGGVVKKGEVVKAVIVRTKKGIARKDGTYIRFDDNAAVIIRDDKQPRGTRIFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_SYNR3 (50S ribosomal protein L14 OS=Synechococcus sp. (strain RCC307) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = -3 Query: 245 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 541 +N ADN+GAK + I V G R A VGD+++ATVK P++ K ++ AV+VR + RR+ G + F+DNA VI+N +G+ + GP+ +E Sbjct: 8 LNVADNSGAKRIQCIRVLGTNRRY-----AHVGDVIVATVKDAMPNMGVKKSDIVKAVVVRTKHTMRRETGNAIRFDDNAAVIINDDKNPRGTRVFGPVARE 104
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MYCVP (50S ribosomal protein L14 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 41/99 (41.41%), Postives = 58/99 (58.59%), Query Frame = -3 Query: 245 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKE 532 ADNTGAK + I V G R A +GD+++ATVK P R V+ AV+VR K RR DG ++ F++NA VI+ + +G+ I GP+G+E Sbjct: 11 ADNTGAKEILCIRVLGGSSRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTAKERRRADGSYIKFDENAAVIIKNDNDPRGTRIFGPVGRE 105
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_MICAN (50S ribosomal protein L14 OS=Microcystis aeruginosa (strain NIES-843) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = -3 Query: 236 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 541 +N ADN+GA+ L + V G +GD ++A VK P++ K V+ AVIVR R+ RR G+ + F+DNA VI+N G KG+ + GP+ +E D Sbjct: 8 LNVADNSGARKLMCLRVLGT----GNCTYGGIGDKIIAVVKDAIPNMPVKKSDVVTAVIVRTRQTVRRDSGMSIRFDDNAAVIINNDGNPKGTRVFGPVARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_LACF3 (50S ribosomal protein L14 OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 37/102 (36.27%), Postives = 62/102 (60.78%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADN+GA+ + +I + G +R+ + +GD+++ATVK+ P + V+ AV+VR + RKDG ++ F++NA V++N KG+ I GPI +E D Sbjct: 11 ADNSGAREILVIKILGG----SRVKTGNIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKHGLHRKDGSYIKFDENAAVLINNDKSPKGTRIFGPIARELRD 108
BLAST of CB304892 vs. ExPASy Swiss-Prot
Match: RL14_DICT6 (50S ribosomal protein L14 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 236 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAIPGPIGKECAD 532 ADNTGAK + + G K A VGD+++A+VK+ P K V+ AV++R ++ +RKDG + F+DNA VI++ +G KG+ + GP+ +E D Sbjct: 11 ADNTGAKEIMCFRILGKKR------VAQVGDIIVASVKEAVPRSNIKKGDVVYAVVIRTKRTIKRKDGSCVRFDDNAAVIIDKEGNPKGTRVFGPVARELRD 106 The following BLAST results are available for this feature:
BLAST of CB304892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 356
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304892 ID=CB304892; Name=CB304892; organism=Citrus sinensis; type=EST; length=618bpback to top |