CB304894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 2.549e-55 Identity = 108/196 (55.10%), Postives = 142/196 (72.45%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S FGNILSC + D +G SKG+GFV FE E+A+ AI K+NGML+N ++VFVG F ++ERE A +F NV++KN E DE LK +FG++G S VM D GKSK FGFV+FE +DA KAVD +NGK+ + ++ YVG+A Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266 HSP 2 Score: 147.132 bits (370), Expect = 6.528e-35 Identity = 80/178 (44.94%), Postives = 110/178 (61.80%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++NG +N KQ++VG +K ER+T +T + N++VKNLD+ DE L+K F +GTITSA VM +G G+SK FGFV F + ++A KAV +NG+ + YV A Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368 HSP 3 Score: 89.3521 bits (220), Expect = 1.615e-17 Identity = 55/176 (31.25%), Postives = 97/176 (55.11%), Query Frame = -2 Query: 36 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGK 560 +PS T ++++ +L + L++ FSP G ILS +I D + S + +V F++ + A++A+D +N +I K V + +R+ K+ N+FVKNLD+S ++ L +G I S V+ D +G SK +GFV+FE + A +A+ +NG + R+ +VG+ Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQ 172 HSP 4 Score: 77.7962 bits (190), Expect = 4.864e-14 Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = -2 Query: 285 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 530 N+++KNLD ID + L FSPFG I S K+ +G G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 295 NLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 214.542 bits (545), Expect = 3.329e-55 Identity = 104/196 (53.06%), Postives = 147/196 (75.00%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+TP+ + RIM+S RDPS+RK G+GNIFIKNL ID+KAL+DTFS FG+ILS KIATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V L ++ER++ +TK + N++VKN++ TTDE +++F ++G I SA + +D DGK K FGFVN+E +DA KAV+ALN + + + YVG+A Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294 HSP 2 Score: 122.094 bits (305), Expect = 2.249e-27 Identity = 77/212 (36.32%), Postives = 112/212 (52.83%), Query Frame = -2 Query: 33 LNFTPLNNKSI----RIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN LN + I + RD + K+ N+++KN++ + + F+ FG I+S + D G+ KGFGFV +E E A A++ LN +N ++++VG +K ER V K K+ N+FVKNLD+S DE L++ F YGTITSA VMR +GKSK FGFV F ++A KA+ N + + YV A Sbjct: 186 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 397 HSP 3 Score: 93.9745 bits (232), Expect = 6.558e-19 Identity = 53/169 (31.36%), Postives = 93/169 (55.03%), Query Frame = -2 Query: 42 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYV 545 ++ + ++++ +L+ S+ L+D FSP G++ S ++ D + S G+ +V F + E+ + AI++LN I + + +R+ K N+F+KNL ++ L F +G I S+ + D +GKSK FGFV+FE A +A+DALNG + +E YV Sbjct: 34 ENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRI----MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV 198 HSP 4 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = -2 Query: 282 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 530 N+F+KNLD S+D + L + F+P+G I S K+ +G+SKGFGFV F E A AI + N ++ K ++V RK R + Sbjct: 323 NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRS 405
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.348e-55 Identity = 101/197 (51.27%), Postives = 148/197 (75.13%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF+ FGNILSCK+A D +G SKG+GFV +E E+A AI +NGML+N+K+V+VGH + K++R++ +K F N++VKN++ TD++ + +F +YG +TS+ + RD + GKS+ FGFVNF + +DA+KAV LN K+F + YVG+A Sbjct: 122 LNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRA 318 HSP 2 Score: 105.531 bits (262), Expect = 2.178e-22 Identity = 72/231 (31.17%), Postives = 107/231 (46.32%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV------------AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-----------------------------GD------------------GKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ NI++KN++ + F +G++ S +A D +G+S+GFGFV F + E A A+ +LN + + ++VG +K ERE A K + N+++KNLD+ DE L+++F E+G ITSA VMRD GD GKSK FGFV F N DDA KAV +N + +++ YV A Sbjct: 238 KANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPGEEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVNNKPLYVALA 468
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_DEBHA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 4.348e-55 Identity = 104/196 (53.06%), Postives = 145/196 (73.98%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN++ + + RIM+S RDPS+R++G GNIFIKNL +ID+KALHDTF+ FG ILSCK+ATD G SK FGFV +E E+A+ AI+ +NGML+ND++V+VG + K++RE+ +K F NV+ KN+D ++E+ KK+F YG ITS + +D +GKSK FGFVNFEN + A KAVD LN K+ + ++ YVG+A Sbjct: 112 LNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRA 307 HSP 2 Score: 122.865 bits (307), Expect = 1.318e-27 Identity = 70/183 (38.25%), Postives = 101/183 (55.19%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ N++ KN+D + F +G I S + D G+SKGFGFV FEN ESA A+D+LN IN ++++VG +K+ER K N N+F+KNLD++ E L++ F +G+ITSA VM D GKSK FGFV F + ++A KA+ +N + + YV A Sbjct: 228 KANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALA 410 HSP 3 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = -2 Query: 282 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 530 N+FIKNLD +ID + L + F PFG+I S ++ D +G+SKGFGFV F + E A AI ++N +I K ++V RK R + Sbjct: 336 NLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRKDVRRS 418
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 9.687e-55 Identity = 103/196 (52.55%), Postives = 148/196 (75.51%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN++ + N+ RIM+S RDP++R++G GNIFIKNLD ID+KALHDTF+ FGNILSCK+AT+ +G S G+GFV +E E+A+ AI +NGML+NDK+V+VGH + ++ER+ +T+ F NV+ KN+D TD++ +K+F ++G ITS V+ RD DGKSK FGFVNFE+ ++A KAVD L+ F ++ +V +A Sbjct: 108 LNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARA 302 HSP 2 Score: 120.168 bits (300), Expect = 8.545e-27 Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT----------KFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 N++ KN+D + F+ FG I SC + D G+SKGFGFV FE+ AQ A+D+L+ +++FV +K ERE ++ KF N+++KN+ ES DE L++ F +G ITS +MR G S+ FGFV + ++A KAV +NGK D+R YV A Sbjct: 228 NVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALA 405 HSP 3 Score: 70.8626 bits (172), Expect = 5.945e-12 Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = -2 Query: 288 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 530 N+++KN+ +S D + L + F+PFG I SCKI SG S+GFGFV + E A A+ ++NG +++++ ++V RK R Sbjct: 331 NLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVR 411
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.158e-54 Identity = 104/196 (53.06%), Postives = 141/196 (71.94%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LNFTP+ K RIM+S RDPS+RK G GNIFIKNL ID+KAL+DTFS FGNILS K+ATD +G+SKGFG+V FE ESA AID LNGML+N ++++VG L K+ERE+ +K F NV++KN++ TTD++ +++ ++G S V+ R +G++K FGFVNF N +DA K V+ LN +F + YV +A Sbjct: 96 LNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRA 291 HSP 2 Score: 104.375 bits (259), Expect = 4.852e-22 Identity = 63/183 (34.43%), Postives = 94/183 (51.37%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ N++IKN++ K + + FG S + G++KGFGFV F N E A +++LN + ++V +K ER+ K K+ N+F+KNLD+S D+ L++ F YGTITSA VM +GKSK FGFV F ++A KA+ N + + YV A Sbjct: 212 KANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 394 HSP 3 Score: 100.138 bits (248), Expect = 9.151e-21 Identity = 57/167 (34.13%), Postives = 93/167 (55.69%), Query Frame = -2 Query: 39 TGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVG 536 + ++++ +LD S+ L+D FSP G + S ++ D + S G+ +V F + ++A+ AI+KLN I K + +R+ K N+F+KNL ++ L F +G I S+ V D GKSK FG+V+FE + A++A+DALNG + +E YVG Sbjct: 34 SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRI----MWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVG 196 HSP 4 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = -2 Query: 282 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 530 N+FIKNLD SID K L + F+P+G I S K+ T +G+SKGFGFV F E A AI + N ++ K ++V RK R + Sbjct: 320 NLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRS 402
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 8.200e-54 Identity = 100/196 (51.02%), Postives = 143/196 (72.96%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+ +N + RIM+S RDP+IRK G+GNIFIKNL +ID+KALH+TFS FG +LSCK+A D +G S+GFGFV F+ + A++AI+ +NGML+N +V+V + K++R + K F N++VKN+D TTDE+ +++F +YG I SA + +D +GK K FGFVNF + + AAKAV+ LNGK+F + YVG+A Sbjct: 111 LNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRA 306 HSP 2 Score: 122.479 bits (306), Expect = 1.722e-27 Identity = 71/183 (38.80%), Postives = 100/183 (54.64%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ NI++KN+D + FS +G I+S + D G+ KGFGFV F + +A A+++LNG + ++VG +K ER K KF N+F+KNLD+S DE LK+ F YGTITSA VMRD +G SK FGFV F + ++A KA+ N + + YV A Sbjct: 227 KANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIA 409 HSP 3 Score: 90.8929 bits (224), Expect = 5.552e-18 Identity = 52/169 (30.77%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 42 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYV 545 ++ ++++ LD +I L+D FSP G I S ++ D + S G+ +V + + E+ + AI +LN IN + + ER+ K N+F+KNL + ++ L + F +G + S V D +G S+ FGFV+F+ DA A++A+NG + E YV Sbjct: 46 ENNNASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQELNYAEINGRPCRI----MWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYV 210 HSP 4 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = -2 Query: 282 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 530 N+FIKNLD SID + L + F+P+G I S ++ D G SKGFGFV F + E A A+ + N ++ K ++V RK R + Sbjct: 335 NLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRKDVRRS 417
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.399e-53 Identity = 104/196 (53.06%), Postives = 140/196 (71.43%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 +NF + + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS FGNILSCK+ D G S+G+GFV FE +E+A AI +NGML+ND++VFVGHF ++ERE A +F NV++KN E D+ L++IF +G S VM D G+S+ FGFVN+ N ++A KAV +NGK+ + R YVG+A Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRA 266 HSP 2 Score: 138.272 bits (347), Expect = 3.032e-32 Identity = 75/179 (41.90%), Postives = 108/179 (60.34%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 N++IKN + +D K L + FS FGN LS K+ D +G+S+GFGFV + N E AQ A+ ++NG +N + ++VG ++ ER+ +K KF N++VKNLD+ D+ L+K F YGTITSA VM +G G SK FGFV F + ++A KAV +NG+ + YV A Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQG-ELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368 HSP 3 Score: 79.337 bits (194), Expect = 1.672e-14 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = -2 Query: 279 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 530 N+++KNLD ID L FSP+G I S K+ T+G G SKGFGFV F + E A A+ ++NG +++ K ++V RK+ER+ + Sbjct: 295 NLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 1.827e-53 Identity = 104/196 (53.06%), Postives = 139/196 (70.92%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 +NF + + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS FGNILSCK+ D G S+G+GFV FE E+A AI +NGML+ND++VFVGHF ++ERE A +F NV++KN E D+ L++IF +G S VM D G+S+ FGFVN+ N ++A KAV +NGK+ + R YVG+A Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRA 266 HSP 2 Score: 139.043 bits (349), Expect = 1.778e-32 Identity = 76/179 (42.46%), Postives = 109/179 (60.89%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 N++IKN + +D K L + FS FGN LS K+ D SG+S+GFGFV + N E AQ A+ ++NG +N + ++VG ++ ER++ +K KF N++VKNLD+ D+ L+K F YGTITSA VM +G G SK FGFV F + ++A KAV +NG+ + YV A Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQS-ELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368 HSP 3 Score: 77.0258 bits (188), Expect = 8.296e-14 Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = -2 Query: 279 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 530 N+++KNLD ID L F P+G I S K+ T+G G SKGFGFV F + E A A+ ++NG +++ K ++V RK+ER+ + Sbjct: 295 NLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.070e-53 Identity = 104/196 (53.06%), Postives = 139/196 (70.92%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 +NF + + IRIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS FG+ILSCK+ D G S+G+GFV FE +E+A AI +NGML+ND++VFVGHF ++ERE A +F NV++KN E D+ LK+IF +G S VM D G+S+ FGFVN+ N ++A KAV +NGK+ + R YVG+A Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRA 266 HSP 2 Score: 137.887 bits (346), Expect = 3.960e-32 Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 N++IKN + +D K L + FS FGN LS K+ D SG+S+GFGFV + N E AQ A+ ++NG +N + V+VG ++ ER+ +K KF N++VKNLD+ D+ L+K F YGTITS VM +G G SK FGFV F + ++A KAV +NG+ + YV A Sbjct: 192 NVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQG-ELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368 HSP 3 Score: 78.9518 bits (193), Expect = 2.183e-14 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = -2 Query: 279 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 530 N+++KNLD ID L FSP+G I S K+ T+G G SKGFGFV F + E A A+ ++NG +++ K ++V RK+ER+ + Sbjct: 295 NLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377 The following BLAST results are available for this feature:
BLAST of CB304894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304894 ID=CB304894; Name=CB304894; organism=Citrus sinensis; type=EST; length=618bpback to top |