CB304894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.158e-15 Identity = 47/157 (29.94%), Postives = 87/157 (55.41%), Query Frame = -2 Query: 66 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 530 N+ + L +++ + L F G I SCK+ D +GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQK 190
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: ELAV2_HUMAN (ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.158e-15 Identity = 47/157 (29.94%), Postives = 87/157 (55.41%), Query Frame = -2 Query: 66 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 530 N+ + L +++ + L F G I SCK+ D +GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQK 190
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: ELAV2_XENLA (ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15 Identity = 47/158 (29.75%), Postives = 86/158 (54.43%), Query Frame = -2 Query: 66 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG--SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 530 N+ + L +++ + L F G I SCK+ D GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 67 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK 218
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: ELAV4_RAT (ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15 Identity = 46/157 (29.30%), Postives = 86/157 (54.78%), Query Frame = -2 Query: 66 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 530 N+ + L +++ + F G I SCK+ D +GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 40 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK 190
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15 Identity = 46/157 (29.30%), Postives = 86/157 (54.78%), Query Frame = -2 Query: 66 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 530 N+ + L +++ + F G I SCK+ D +GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 52 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK 202
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15 Identity = 46/157 (29.30%), Postives = 86/157 (54.78%), Query Frame = -2 Query: 66 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 530 N+ + L +++ + F G I SCK+ D +GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 47 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK 197
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: SXL_DROSU (Protein sex-lethal OS=Drosophila subobscura GN=Sxl PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15 Identity = 49/160 (30.63%), Postives = 85/160 (53.12%), Query Frame = -2 Query: 75 RKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENVDDAAKAVDALN 548 ++S N+ + L + + + L+ F G I +C+I D +G S G+ FV F ++ +Q AI LNG+ + +K++ V + E K N++V NL + TD+ L IFG+YG+I ++RD G+ + FV + ++A +A+ ALN Sbjct: 122 QRSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGE------SIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 275
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: MRD1_EMENI (Multiple RNA-binding domain-containing protein 1 OS=Emericella nidulans GN=mrd1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15 Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = -2 Query: 78 TGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATD------GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV--------GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDAL 536 T +FIKNL+ S +++L + F P +S +I T G S GFGF F+ K AQ A+ +NG ++ + V R++E I + + +KNL T +D++ +FG YG + S V + D ++ FGF +F + +A A+DAL Sbjct: 591 TATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKAQAQAALAVMNGYTLDRHTLVVRASHKGMDAAEERRKEDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDAL 757
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: MRD1_ASPFU (Multiple RNA-binding domain-containing protein 1 OS=Aspergillus fumigatus GN=mrd1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15 Identity = 54/193 (27.98%), Postives = 90/193 (46.63%), Query Frame = -2 Query: 78 LNNKSIRIMYSHRDPSIRKSG-----TGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATD------GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV--------GHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDAL 599 L K++ +S D + G T +F+KNL+ S ++ + F P +S +I T G S GFGFV F K AQ A+ ++G ++ ++ V R++E I + + +KNL T +D++ +FG YG + S V + D ++ FGF +F + +A A+DAL Sbjct: 570 LETKAVSQGFSTADTFAAEDGDEPVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAAMDGYKLDQHELVVRASNKAMDAAEERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDAL 762
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: SXL_CERCA (Sex-lethal homolog OS=Ceratitis capitata GN=SXL PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15 Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = -2 Query: 75 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENVDDAAKAVDALN 530 N+ + L + + + L+ F G I +C+I D +G S G+ FV F + +Q AI LNG+ + +K++ V + E K N++V NL + TD+ L IFG+YG I ++RD GK + FV F ++A +A+ ALN Sbjct: 111 NLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYARPGGE------SIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 258 The following BLAST results are available for this feature:
BLAST of CB304894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304894 ID=CB304894; Name=CB304894; organism=Citrus sinensis; type=EST; length=618bpback to top |