CB417297

Overview
NameCB417297
Unique NameCB417297
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:800..1391. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.343e-62
Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            RMV+H  +EFKRK+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK  R
Sbjct:  239 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALR 325          

HSP 2 Score: 125.946 bits (315), Expect = 1.343e-62
Identity = 65/110 (59.09%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TY
Sbjct:  325 RDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTY 434          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.283e-62
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+VNHFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  M+PVE+  R
Sbjct:  233 RLVNHFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLR 319          

HSP 2 Score: 119.013 bits (297), Expect = 2.283e-62
Identity = 64/114 (56.14%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  250 RNARDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            R  RDAK+DKSSVH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +             ETAGGVMT LI RNTTIPTKK + FST+
Sbjct:  316 RVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDSTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTF 429          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.283e-62
Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            RMVNHF + FKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEEL  DLFR  +EPVEK  R
Sbjct:  238 RMVNHFHEPFKRKHKKDITKNKRAVRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELCADLFRGPLEPVEKALR 324          

HSP 2 Score: 129.413 bits (324), Expect = 2.283e-62
Identity = 64/110 (58.18%), Postives = 79/110 (71.82%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RDAK+DK+ +H++VLVGGSTRIPK+Q+LLQDFFNG+EL KSINPDE           IL G+ +E +QD             ETAGGVMTVLI RN+TIPTK+ Q+F+TY
Sbjct:  324 RDAKLDKAQIHEIVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDKSENLQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTY 433          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.976e-62
Identity = 67/110 (60.91%), Postives = 78/110 (70.91%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RDAK+DK +VH++VLVGGSTRIPKVQ+LLQDFFNG+EL KSINPDE           IL+G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TY
Sbjct:  324 RDAKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTY 433          

HSP 2 Score: 129.413 bits (324), Expect = 2.976e-62
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+VNHFV+EFKRK+K KD++ N RA+RRLRTACERAKRTLSS+AQ  IEIDSL EGIDFYT+ITRARFEEL  DLFR  ++PVEK  R
Sbjct:  237 RLVNHFVEEFKRKHKGKDLTTNKRAVRRLRTACERAKRTLSSSAQANIEIDSLLEGIDFYTSITRARFEELCSDLFRSTLDPVEKALR 324          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 3.881e-62
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+VNHFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  M+PVE+  R
Sbjct:  234 RLVNHFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLR 320          

HSP 2 Score: 118.242 bits (295), Expect = 3.881e-62
Identity = 64/114 (56.14%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  250 RNARDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            R  RDAK+DKSSVH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +             ETAGGVMT LI RNTTIPTKK + FST+
Sbjct:  317 RVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTF 430          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 3.882e-62
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = 3
Query:    6 MVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            MV+H  +EFKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK  R
Sbjct:  240 MVSHLAEEFKRKHKKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALR 325          

HSP 2 Score: 125.946 bits (315), Expect = 3.882e-62
Identity = 65/110 (59.09%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TY
Sbjct:  325 RDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTY 434          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.882e-62
Identity = 65/87 (74.71%), Postives = 76/87 (87.36%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            RMVN FV+EFK K+K+D +GN RA+RRLRTACERA+RTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEELN DLFR  +EPVEK  R
Sbjct:  239 RMVNRFVEEFKGKHKRDNAGNKRAVRRLRTACERARRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRGTLEPVEKALR 325          

HSP 2 Score: 127.102 bits (318), Expect = 3.882e-62
Identity = 65/110 (59.09%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK+ Q F+TY
Sbjct:  325 RDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTY 434          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.122e-61
Identity = 70/110 (63.64%), Postives = 79/110 (71.82%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RD+K+ KS +HDVVLVGGSTRIPKVQQLL D+FNGKELCK+INPDE           IL+G+ +EK+ D             ETAGGVMTVLI RNTTIPTKK QVFSTY
Sbjct:  329 RDSKISKSEIHDVVLVGGSTRIPKVQQLLIDYFNGKELCKNINPDEAVAYGAAVQAAILAGDTSEKM-DLLLLDVSPLSLGLETAGGVMTVLIKRNTTIPTKKTQVFSTY 437          

HSP 2 Score: 126.331 bits (316), Expect = 1.122e-61
Identity = 63/87 (72.41%), Postives = 72/87 (82.76%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+VN FV EFKRK KKD++ N R+LRRLRTACERAKRTLSS  QTT+EIDSL +GID+Y +ITRA+FEEL MDLFR   EPVEK  R
Sbjct:  243 RLVNFFVSEFKRKYKKDVTSNARSLRRLRTACERAKRTLSSGTQTTVEIDSLIDGIDYYASITRAKFEELCMDLFRGTSEPVEKVLR 329          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.463e-61
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+VNHFVQEFKRK+KKD+SG  R  RRLRTACERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  ++PVEK  R
Sbjct:  240 RLVNHFVQEFKRKHKKDLSGKARP-RRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLR 325          

HSP 2 Score: 124.02 bits (310), Expect = 1.463e-61
Identity = 64/110 (58.18%), Postives = 75/110 (68.18%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RDAKM K+ VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           IL+G+ +EKVQD             ETAGGVMT LI RNTTIP KK + FSTY
Sbjct:  325 RDAKMAKNEVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILAGDQSEKVQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPAKKSETFSTY 434          
BLAST of CB417297 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.486e-61
Identity = 70/111 (63.06%), Postives = 77/111 (69.37%), Query Frame = 1
Query:  259 RDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTY 588
            RD+K+ KS VH+VVLVGGSTRIPKVQQLL DFFNGKE CKSINPDE           ILSG + +EK+QD             ETAGGVMT LI RNTT+PTKK Q FSTY
Sbjct:  324 RDSKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPCKSINPDEAVAFGATVQAAILSGNDSSEKLQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTVPTKKSQTFSTY 434          

HSP 2 Score: 124.405 bits (311), Expect = 2.486e-61
Identity = 62/87 (71.26%), Postives = 74/87 (85.06%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCER 263
            R+V+HF  EFKRK++KD++ N RALRRLRTACERAKRTLSS+AQ  IEIDSL++GIDF +TITRARFE++  D FRK MEPVEK  R
Sbjct:  238 RLVDHFTAEFKRKHRKDMTQNQRALRRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTITRARFEDMCGDYFRKTMEPVEKVLR 324          
The following BLAST results are available for this feature:
BLAST of CB417297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_MOUSE1.343e-6275.86Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP71_PARBA2.283e-6280.46Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP70_PLEWA2.283e-6275.86Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_ECHGR2.976e-6260.91Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP72_PARBA3.881e-6280.46Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP72_BOVIN3.882e-6275.58Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP70_CHICK3.882e-6274.71Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP70_PYRSA1.122e-6163.64Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_BLAEM1.463e-6178.16Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP70_ACHKL2.486e-6163.06Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]

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Properties
Property NameValue
Genbank descriptionEST0370 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P015 similar to 70 kDa heat shock protein (acc# AAL24367), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417297 ID=CB417297; Name=CB417297; organism=Citrus sinensis; type=EST; length=590bp
ACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAAAACAAGAAG
GATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACTGCCTGTGA
AAGGGCTAAGAGGACCCTGTCATCAACCGCACAGACTACAATTGAGATTG
ATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAGGGCTAGA
TTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCAGTGGA
GAAATGCGAGAGATGCTAAGATGGACAAGAGCAGTGTCCATGATGTGGTT
CTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACTGTTGCAGGA
CTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTGATGAAGCGG
TTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTAAT
GAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTGGG
TTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCA
CTATTCCAACCAAGAAGGAGCAGGTGTTCTCCACATACTC
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