CB417302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.328e-45 Identity = 92/153 (60.13%), Postives = 108/153 (70.59%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RRS+VFDPFSLD+WDPF + +AF N R+DWKETPE+HVFKADLPG++ + L ISGQR+ EKEDK+D WHRVERSSG F RRFRLPENAK+D++KA MENGVLTVTVPKA E KK V+AI+ISG Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSD------NDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKA-EVKKPEVKAIEISG 150
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.250e-44 Identity = 94/158 (59.49%), Postives = 110/158 (69.62%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVWDPFR-----DXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RRS+VFDPFSLD+WDPF E +AF R+DWKETPEAHVFKAD+PGL+ D LQISG+RN E+E+K+D WHRVERSSG F RRFRLP+NAK ++IKASMENGVLTVTVPK EEAKK +V++IQISG Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPK-EEAKKPDVKSIQISG 161
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.633e-44 Identity = 91/153 (59.48%), Postives = 108/153 (70.59%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RRS+VFDPFSLD+WDPF + +AF N R+DWKETPE+HVFKADLPG++ + L ISGQR+ EKEDK+D WHRVERSSG F RRFRLPENAK+D++KA +ENGVLTVTVPKA E KK V+AI+ISG Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSD------NDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKA-EVKKPEVKAIEISG 150
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.204e-44 Identity = 95/164 (57.93%), Postives = 113/164 (68.90%), Query Frame = 2 Query: 62 MSLIPSFFGN--RRSSVFDPFSLD-VWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544 MSLIP+ + N RRS++FDPFSLD +WDPF E +AF N R+DWKETPEAHVFKADLPG++ D L+ISGQR EKE+K+DTWHRVERSSG F R+FRLPENAK+D++KA MENGVLTVTVPK EA K V+AI + Sbjct: 1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPF---FGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPK-NEAPKPQVKAINV 160
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.357e-43 Identity = 91/153 (59.48%), Postives = 108/153 (70.59%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RRS+VFDPFSLD+WDPF +A+AF R+DWKETPEAHVFKAD+PGL+ D LQISG+R E+E+K+D WHRVERSSG F RRFRLPEN K ++IKASMENGVLTVTVPK EE KK +V++IQI+G Sbjct: 5 RRSNVFDPFSLDLWDPF--DGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQITG 154
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.252e-43 Identity = 90/158 (56.96%), Postives = 108/158 (68.35%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVWDPFR-----DXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RRS+VFDPFSLD+WDPF E +AF R+DWKETPEAHVFKAD+PGL+ D LQISG+R+ E+E+K+D WHRVERSSG F RRFRLPEN K ++IKASMENGVLTVTVPK EE KK +V++IQ++G Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQVTG 161
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.958e-43 Identity = 92/153 (60.13%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RRS+VFDPF+ D WDPF + +AF N RVDWKETPE+HVFKADLPG++ + L ISGQR+ EKEDK+D WHRVERSSG F RRFRLPENAK+D++KASMENGVLTVTVPKA E KK V+AI+ISG Sbjct: 5 RRSNVFDPFA-DFWDPFDGVFRSLVPATSDR------DTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKA-EVKKPEVKAIEISG 149
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.606e-42 Identity = 90/156 (57.69%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVWDP---FRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RR + FDPFSLD+WDP F +A+AF R+DWKETPE HVFKAD+PGL+ D LQISG+R+ E+E+KSD WHRVERSSG F RRFRLPEN K ++IKASMENGVLTVTVPK EE KK +V++IQISG Sbjct: 5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQISG 159
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.098e-40 Identity = 88/154 (57.14%), Postives = 105/154 (68.18%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVW-DPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RRS+VFDPF+ D+W DPF E +AF N RVDWKETPEAHVFK DLPG++ D L +SG+R+ EKEDK+D WHRVERSSG F RRFRLPE+AK++ +KA +ENGVLTVTVPKA E KK V+AI+ISG Sbjct: 5 RRSNVFDPFA-DLWADPF-----DTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKA-EVKKPEVKAIEISG 151
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.025e-38 Identity = 87/154 (56.49%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 92 RRSSVFDPFSLDVW-DPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQISG 550 RR++VFDPF+ D+W DPF E +AF N R+DWKETPEAHVFKADLPG++ D L +SG+R EKEDK+D WHRVERSSG F RRFRL E+AK++ +KA +ENGVLTVTVPKA E KK V+AIQISG Sbjct: 5 RRTNVFDPFA-DLWADPF-----DTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKA-EVKKPEVKAIQISG 151 The following BLAST results are available for this feature:
BLAST of CB417302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417302 ID=CB417302; Name=CB417302; organism=Citrus sinensis; type=EST; length=730bpback to top |