CB417311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HFC1A_ORYSJ (Heat stress transcription factor C-1a OS=Oryza sativa subsp. japonica GN=HSFC1A PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.043e-26 Identity = 76/184 (41.30%), Postives = 93/184 (50.54%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEAC------------LEVGQYGLDGELERLKRD----RNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLVQSNAHRRELGGVQTGRKRRLTATPSME 505 LP +FKH NFSSF+RQLNTYGFRKV PDRWEFA+E FL GQ HLL I RR+ + GG +C G+ GE E D L E+ RLR Q ++L+ M RL +TE++ Q+M+FLAK +P NA L RKRR PS E Sbjct: 66 LPCFFKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRKKRGEGGGGGGGASCSFGGGAGEHQVAAAAASVGMSGEEEDAAEDVLAKEAALFEEVQRLRHEQTAIGEELARMSQRLQATERRPDQLMSFLAKLADDP---------NAVTGHLLEQAAERKRRRQHLPSHE 240
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26 Identity = 55/136 (40.44%), Postives = 88/136 (64.71%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSF 409 LP YFKH+NFSSFIRQLNTYGFRK+DP+RWEF N+ F+ QKHLLK I RR+ + E + L ++++L R++ + A++++ +Q + ++ Q M + + E +Q++++ FL A++NP+F Sbjct: 63 LPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHSHPPASSTDQE--RAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENRQKKLLNFLETAIRNPTF 196
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HFC2B_ORYSJ (Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica GN=HSFC2B PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25 Identity = 65/146 (44.52%), Postives = 89/146 (60.96%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGG-----EACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLV 424 LP +FKH+NFSSF+RQLNTYGFRKVDPDRWEFA+ FL GQ HLL+ I RR + GG +A + G G D D ++ E+VRL+Q Q+ D+++AM R+ TE++ +QM+ FL K + + +LV Sbjct: 51 LPAHFKHNNFSSFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRRGSAAAGGGGGGGGGKRRDASADGGGGGGD-------EDMTMVATEVVRLKQEQRTIDDRVAAMWRRVQETERRPKQMLAFLLKVVGDRDKLHRLV 189
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HFA4C_ARATH (Heat stress transcription factor A-4c OS=Arabidopsis thaliana GN=HSFA4C PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25 Identity = 55/150 (36.67%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR--HVSQSMQQRGGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLVQSNAHRR 445 LP++FKH NFSSFIRQLNTYGFRKVDP++WEF N+ F+ G+ +L+K I RR+ H + + E + ++ ++ERLK ++ L+AE+ Q +++ Q++ ++DRL E+ Q+ ++ ++++ L P L +R Sbjct: 53 LPRFFKHKNFSSFIRQLNTYGFRKVDPEKWEFLNDDFVRGRPYLMKNIHRRKPVHSHSLVNLQAQNPLTESERRSMEDQIERLKNEKEGLLAELQNQEQERKEFELQVTTLKDRLQHMEQHQKSIVAYVSQVLGKPGLSLNLENHERRKR 202
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HFA4A_ARATH (Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.763e-25 Identity = 56/137 (40.88%), Postives = 93/137 (67.88%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHV-SQSMQ--QRGGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNP 403 LP++FKH+NFSSFIRQLNTYGFRK DP++WEFAN+ F+ GQ HL+K I RR+ V S S+ Q + + ++ ++ERL +++ L+ E+ + + ++ Q+ +++RL EK+Q+ M++F+++ L+ P Sbjct: 55 LPRFFKHNNFSSFIRQLNTYGFRKADPEQWEFANDDFVRGQPHLMKNIHRRKPVHSHSLPNLQAQLNPLTDSERVRMNNQIERLTKEKEGLLEELHKQDEEREVFEMQVKELKERLQHMEKRQKTMVSFVSQVLEKP 191
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HFC1B_ORYSJ (Heat stress transcription factor C-1b OS=Oryza sativa subsp. japonica GN=HSFC1B PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24 Identity = 64/136 (47.06%), Postives = 83/136 (61.03%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEA--CLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNP 403 LP YFKH NF+SF+RQLNTYGFRKVDPDRWEFA+E FL GQ LL I R++ ++GG A C E+ + G + R + A + RLR+ Q+ ++L AM+ RL + E + QMM FLAK P Sbjct: 64 LPSYFKHRNFASFVRQLNTYGFRKVDPDRWEFAHESFLRGQAQLLPRIVRKK-------KKGGAAPGCRELCEEG--------EEVRGTIEA-VQRLREEQRGMEEELQAMDQRLRAAESRPGQMMAFLAKLADEP 183
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18 Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQS 172 LPKYFKH+NFSSF+RQLNTYGFRK+ PD+WEFANE F GQK LL I+RR+ V+ + Sbjct: 49 LPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTST 105
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQ 181 LP YFKH+NFSSF+RQLNTYGFRK+ PDRWEFANE F G+KHLL I RR+ QQ Sbjct: 74 LPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTSQMIPQQ 133
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica GN=HSFB4D PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16 Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQ 181 LP YFKH+NFSSF+RQLNTYGFRK+ DRWEFANE F G KHLL I RR+ S S Q Sbjct: 76 LPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQ 135
BLAST of CB417311 vs. ExPASy Swiss-Prot
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.278e-16 Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 2 Query: 2 LPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEV 208 LPKYFKH+NFSSF+RQLNTYGFRKV PDRWEF+N+ F G+K LL+ I+RR+ +M A V Sbjct: 99 LPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRKISQPAMAAAAAAAAAAV 167 The following BLAST results are available for this feature:
BLAST of CB417311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB417311 ID=CB417311; Name=CB417311; organism=Citrus sinensis; type=EST; length=683bpback to top |