CF417071
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 1.955e-59 Identity = 105/144 (72.92%), Postives = 121/144 (84.03%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 430 N AL N+ GGWCNPP +HFDL++P F IAQYRAG+VPVA+RRVPC + GGIRFTING+ YF+LVLITNVGGAGD+ AVS+KGS+T WQ MSRNWGQNWQSNTYL GQSLSF+VT SDGRTV SY+V P W FG+T+ G QF Sbjct: 112 NFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 1.955e-59 Identity = 104/143 (72.73%), Postives = 119/143 (83.22%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 430 N AL +AGGWCNPP+ HFD+++P F IAQ RAGVVPV YRRV C ++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+GWQ MS NWG NWQ+ L+GQ LSF VT SDGRTVTS NVAP+GWSFG+T+SG QF Sbjct: 106 NYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF 248
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.687e-59 Identity = 100/144 (69.44%), Postives = 119/144 (82.64%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 433 N ALP++ GGWCNPP+ HFDL+ P+F HIA+YRAG+VPV+YRRVPC ++GG+RFTING YFNLVLITNV GAGD+ S+KG+ TGW PMSRNWGQNWQSN+ L GQ+LSF VT SD RT TS+N APAGW FG+T+ G FR Sbjct: 120 NYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFR 263
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.212e-58 Identity = 100/144 (69.44%), Postives = 117/144 (81.25%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 433 N A P++ GGWCNPP++HFDL+ PVF IAQYRAG+VPV+YRRVPC +RGGIRFTINGH YFNLVLITNV GAGD+ S+KGSRTGW +SRNWGQNWQSN L GQ+LSF VT SD RT TS+N+ P+ W FG+T+ G FR Sbjct: 113 NLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFR 256
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.212e-58 Identity = 99/146 (67.81%), Postives = 122/146 (83.56%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK---GSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 430 N+ALP + GGWCNPP HFDLSQP F IA++++G+VPV+YRRV C R+GG+RFTINGHSYFNLVL++NVGGAGDVHAV++K G + WQ M+RNWGQNWQS L+GQ+LSF VTT D R+V SYNVAPAGW+FG+T++G QF Sbjct: 118 NHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.389e-57 Identity = 95/149 (63.76%), Postives = 124/149 (83.22%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG------WQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQF 430 N ALP++ GGWCNPP++HFDL++P F IA++ AG+VPV++RRV C R+GG+RFT+NGH+YFNLVL+TNVGGAGDV ++++KGS +G WQPMSRNWGQNWQSN YL+G++LSF VT DGR++T +VAPAGW FG+T+ G QF Sbjct: 111 NYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 2.642e-56 Identity = 94/142 (66.20%), Postives = 119/142 (83.80%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 427 N ALPN+AGGWCNPP+QHFD+++P + I Y G+VPV Y+RVPC ++GG+RFTING YF LVL++NVGG G + +VSIKGSRTGW MSRNWG NWQSN YL+GQSLSF+VT+SDG+T+T +VAPAGW+FG+T+S +Q Sbjct: 117 NYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQ 258
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.642e-56 Identity = 96/144 (66.67%), Postives = 116/144 (80.56%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 433 N A P++ GGWCNPP+ HFDL+ PVF IA+YRAG+VP++YRRV C + GGIRFTINGH YFNLVLITNV GAGD+ S+KGS+TGW ++RNWGQNWQSN L GQSLSF VT+SD RT TS+N+AP+ W FG+T+ G FR Sbjct: 116 NLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFR 259
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.311e-55 Identity = 97/144 (67.36%), Postives = 116/144 (80.56%), Query Frame = 2 Query: 2 NNALPNNAGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 433 N A P++ GGWCNPP++HFDL+ P+F I YRAG+VPV+YRRVPC + GGIRFT+NG YFNLVL+TNV GAGD++ VS+KGS+T W MSRNWGQNWQSN L GQSLSF VT SD R+ TS+NVAPA W FG+T+SG FR Sbjct: 118 NFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFR 261
BLAST of CF417071 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.507e-55 Identity = 94/136 (69.12%), Postives = 112/136 (82.35%), Query Frame = 2 Query: 26 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQFR 433 GGWCNPP++HFDL+ P+F IA+Y+AG+VPV+YRR+PC ++GGIRFTING YFNLVL+TNV GAGDV VS+KGS T W +SRNWGQNWQSN L GQSLSF V TSDGR+ TS N+AP+ W FG+TYSG FR Sbjct: 122 GGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFR 257 The following BLAST results are available for this feature:
BLAST of CF417071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417071 ID=CF417071; Name=CF417071; organism=Citrus sinensis; type=EST; length=662bpback to top |