CF417077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_METMA (50S ribosomal protein L10e OS=Methanosarcina mazei GN=rpl10e PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.350e-21 Identity = 47/121 (38.84%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M R+P YR ++ + + + ++ GVP ++ YD+G K FP + LV+ EK + ALEAARI N+++ AGK F++++RV+P VLR NK + AGADR+ +GM F K Sbjct: 1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKANTT--FPVKISLVAEEKCQIRHTALEAARITANRHLVADAGKMGFYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGK 119 HSP 2 Score: 33.4982 bits (75), Expect = 1.350e-21 Identity = 21/52 (40.38%), Postives = 28/52 (53.85%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 549 R AFGK GT ARV Q L +V + N A++AL A K P +I++ Sbjct: 114 RRAFGKNVGTAARVNSMQKLFTVAVEKQNFPAAKKALWHAGQKLPTPVRIVI 165
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_THEON (50S ribosomal protein L10e OS=Thermococcus onnurineus (strain NA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.967e-21 Identity = 47/121 (38.84%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MG RPA+ R + Y + + RG P PKI I+D+G EF + V L + + + ALEA RI N+Y+ K G+ +H ++RV+PF VLR N M + ADR GM F K Sbjct: 1 MGLRPAKIDRDVDKPAYTRREYIRGAPGPKITIFDMGNLSA---EFQYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGK 118 HSP 2 Score: 36.5798 bits (83), Expect = 2.967e-21 Identity = 20/45 (44.44%), Postives = 25/45 (55.56%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFP 528 R FGKP G ARV Q +L+V + + A EA+RRA K P Sbjct: 113 RRPFGKPIGLAARVKKDQKILTVWVNEGHLKFALEAMRRAAMKLP 157
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_THESM (50S ribosomal protein L10e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl10e PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.860e-21 Identity = 47/121 (38.84%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M RPA+ R + Y + + RG P P+I I+D+G +F F V L + E + ALEAAR N+Y++K G+ FH ++RV+PF VLR N M + ADR GM F K Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPRITIFDMG---NPAGDFEFEVSLHTAEPVQIRQNALEAARTQLNRYLSKNVGRSNFHYKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGK 118 HSP 2 Score: 36.5798 bits (83), Expect = 3.860e-21 Identity = 19/45 (42.22%), Postives = 25/45 (55.56%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFP 528 R FGKP G AR+ Q +L+VR + A A++RA KFP Sbjct: 113 RRPFGKPIGLAARLKKDQKILTVRVNKQHLKFALAAMKRASMKFP 157
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_HALMA (50S ribosomal protein L10e OS=Haloarcula marismortui GN=rpl10e PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.863e-21 Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M +PA YR I Y + + G+P KI + +G K+K D++P + L+ E + +LEA+R++ N+++ K G++ + + +R P VLR NK + AGADR+ GM F K Sbjct: 1 MSDKPASMYRDIDKPAYTRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGK 122 HSP 2 Score: 41.9726 bits (97), Expect = 3.863e-21 Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 555 R AFGK GT ARV G+ L + C ++ H +EA RRA K +I V R Sbjct: 117 RAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRIKVER 170
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_PYRFU (50S ribosomal protein L10e OS=Pyrococcus furiosus GN=rpl10e PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.533e-21 Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M RPA+ R + Y + + RG P PKI I+D+G +F F V L + E + ALEAAR N+Y+ K G+ +H ++RV+PF VLR N M + ADR GM F K Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVSLHTAEPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGK 118 HSP 2 Score: 36.965 bits (84), Expect = 6.533e-21 Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFP 528 R FGKP G AR+ Q +LS+R + A E RRA KFP Sbjct: 113 RRPFGKPIGLAARLKKDQKILSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_METAC (50S ribosomal protein L10e OS=Methanosarcina acetivorans GN=rpl10e PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.546e-21 Identity = 44/121 (36.36%), Postives = 70/121 (57.85%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M R+P YR ++ + + + ++ GVP ++ YD+G K FP + L+ EK + ALEAARI N+++ GK F++++RV+P V+R NK + AGADR+ +GM F K Sbjct: 1 MVRKPGSMYRNVRQRSFTRRKYMGGVPGSQVIHYDMGDKAN--TSFPVKISLIVEEKCQIRHTALEAARITANRHLVADTGKMGFYMKLRVYPHEVIRENKQATGAGADRVSSGMRRAFGK 119 HSP 2 Score: 34.6538 bits (78), Expect = 6.546e-21 Identity = 22/52 (42.31%), Postives = 28/52 (53.85%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 549 R AFGK GT ARV Q + +V + N A+EAL A K P +I+V Sbjct: 114 RRAFGKNVGTAARVKPMQKIFTVAVEKQNFKAAKEALWHAGQKLPTPCRIVV 165
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_PYRHO (50S ribosomal protein L10e OS=Pyrococcus horikoshii GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.499e-21 Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M RPA+ R + Y + + RG P PKI I+D+G +F F V L + E + ALEAAR N+Y+ K G+ +H ++RV+PF VLR N M + ADR GM F K Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHTAEPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGK 118 HSP 2 Score: 36.965 bits (84), Expect = 8.499e-21 Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFP 528 R FGKP G AR+ Q +LS+R + A E RRA KFP Sbjct: 113 RRPFGKPIGLAARLKRDQKILSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_THEGJ (50S ribosomal protein L10e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.438e-20 Identity = 47/121 (38.84%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MG RPA+ R + Y + + RG P PKI I+D+G EF + V L + + + ALEA RI N+Y+ K G+ +H ++RV+PF VLR N M + ADR GM F K Sbjct: 1 MGLRPAKIDRDVDKPAYTRREYIRGAPGPKITIFDMGNLSA---EFEYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGK 118 HSP 2 Score: 34.2686 bits (77), Expect = 1.438e-20 Identity = 19/45 (42.22%), Postives = 24/45 (53.33%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFP 528 R FGKP G ARV Q +L+V + + A A+ RAK K P Sbjct: 113 RRPFGKPIGLAARVKKDQKILTVWVNEQHLKFALGAMHRAKMKLP 157
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_METST (50S ribosomal protein L10e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.446e-20 Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 90 KPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWKA 413 +PY + + R +P KI YD+G EFP V L E ++S +LEAARIA N+Y+ + GK + L++R +P H++R N M + AGADR+Q+GM G F KA Sbjct: 3 RPYTRKDYIRKIPASKIVQYDMGNLS---GEFPLEVTLAVKEHTHLSHNSLEAARIAANRYLQRTTGKLGYRLKIRTYPHHIVRENPMATGAGADRVQSGMRGAFGKA 107 HSP 2 Score: 32.3426 bits (72), Expect = 1.446e-20 Identity = 18/61 (29.51%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKF 576 RGAFGK + A V Q +++ + + A+ AL RA K P K+++ + +F Sbjct: 101 RGAFGKAVSSEALVRANQKIITAYVQVKDFEKAKVALNRAAMKLPVTCKLVIDKGHDLVQF 161
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_PYRAR (50S ribosomal protein L10e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl10e PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.536e-20 Identity = 52/117 (44.44%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 57 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCF 404 RPARCYR+IK PY + + G P +I +D+G FP L+ E+ + +ALEAAR +KY+ KY G ++LR+ V P HVLR N+ML+ AGADRLQ GM F Sbjct: 4 RPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARATFPMVAKLIVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVIPHHVLRENRMLAMAGADRLQEGMRLAF 120 The following BLAST results are available for this feature:
BLAST of CF417077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417077 ID=CF417077; Name=CF417077; organism=Citrus sinensis; type=EST; length=703bpback to top |