CF417077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_SULIM (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.426e-19 Identity = 44/120 (36.67%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCF 404 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GM F Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSF 117 HSP 2 Score: 37.7354 bits (86), Expect = 7.426e-19 Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVA-IGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 543 R +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 114 RLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_SULIL (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.426e-19 Identity = 44/120 (36.67%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCF 404 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GM F Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSF 117 HSP 2 Score: 37.7354 bits (86), Expect = 7.426e-19 Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVA-IGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 543 R +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 114 RLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_SULIK (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.426e-19 Identity = 44/120 (36.67%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCF 404 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GM F Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSF 117 HSP 2 Score: 37.7354 bits (86), Expect = 7.426e-19 Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVA-IGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 543 R +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 114 RLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_SULIA (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.426e-19 Identity = 44/120 (36.67%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCF 404 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K + K G + +F + + +P HVLR NKM++ AGADRLQ GM F Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSF 117 HSP 2 Score: 37.7354 bits (86), Expect = 7.426e-19 Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVA-IGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 543 R +FG P GT AR+ +G++L+ V+ K + A+EAL+ A K P R +I Sbjct: 114 RLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.665e-19 Identity = 38/119 (31.93%), Postives = 66/119 (55.46%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCF 404 M +PA YR+I Y + + G+P KI + +G + D++P + LV E+ + +LEAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GM F Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAF 119 HSP 2 Score: 36.5798 bits (83), Expect = 9.665e-19 Identity = 22/54 (40.74%), Postives = 27/54 (50.00%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 555 R AFG P GT AR+ G L + C+ + +EA RRA K KI V R Sbjct: 116 RQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.665e-19 Identity = 38/119 (31.93%), Postives = 66/119 (55.46%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCF 404 M +PA YR+I Y + + G+P KI + +G + D++P + LV E+ + +LEAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GM F Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAF 119 HSP 2 Score: 36.5798 bits (83), Expect = 9.665e-19 Identity = 22/54 (40.74%), Postives = 27/54 (50.00%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 555 R AFG P GT AR+ G L + C+ + +EA RRA K KI V R Sbjct: 116 RQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_SULSO (50S ribosomal protein L10e OS=Sulfolobus solfataricus GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-18 Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCF 404 M RP RCYR Y + + G+P PKI + G ++ + V L++ E + ALEA R K ++K G + +F + + +P HVLR NKM++ AGADRLQ GM F Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPN---GDYDYEVRLITTEIGQIRHNALEAVRTLTLKTLSKKTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSF 117 HSP 2 Score: 36.5798 bits (83), Expect = 1.256e-18 Identity = 20/51 (39.22%), Postives = 31/51 (60.78%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVA-IGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKI 543 R +FG P GT AR+ +G+ L+ ++ K + A+EAL+ A K P R +I Sbjct: 114 RLSFGTPIGTAARIEKLGETLIVIKVKKEHLEFAKEALKIASKKLPLRTRI 164
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.764e-18 Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M +PA YR++ Y + + G+P KI +++G + G ++P + L E+ + +LE+AR++ N+ M K G+D + + +R P +LR NK + AGADR+ GM F K Sbjct: 1 MSDKPASMYRKLSKPSYTRRDYVTGIPGSKIAQHNMGNLQTGPQDYPVQISLRIEEECQIRHGSLESARLSANRTMLKQVGQDNYKMVLRKFPHQILRENKQATGAGADRVSDGMRQAFGK 121 HSP 2 Score: 35.8094 bits (81), Expect = 2.764e-18 Identity = 22/61 (36.07%), Postives = 35/61 (57.38%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRA--KFKFPGR------QKIIVS 552 R AFGKP GT AR+ + + ++ C+ ++ A++ LRRA K P R QK+++S Sbjct: 116 RQAFGKPVGTAARIQQNERVFTIYCEVDDASVAKDGLRRAYNKMSPPCRIDVEKGQKLLIS 176
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_METHJ (50S ribosomal protein L10e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16 Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWKAPRNLCSC 434 M R+P YR + K Y + + G+P K+ +D+G EFP V LV E + ALEAAR++ N+ + K G+ +HL++R +P HVLR NK + AGADR+ GM F KA C Sbjct: 1 MVRKPNSMYRNLAKKAYTRKEYMGGIPGVKVVHFDMGNL---TSEFPMEVSLVVDESCQIRHSALEAARMSINRKLNKELGRMNYHLKLRTYPHHVLRENKQATGAGADRVSQGMRLAFGKAVGTAARC 126
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.091e-16 Identity = 37/121 (30.58%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M +PA YR I Y + + G+P KI +++G D++P + L E+ + +LE++R++ N+++ K G+ + + +R P V+R NK + AGADR+ GM F K Sbjct: 1 MSDKPASMYRTIDKPSYTRREYITGIPGSKIAQHNMGDLSAEPDDYPVQISLRVEEELQIRHGSLESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGK 121 HSP 2 Score: 35.039 bits (79), Expect = 1.091e-16 Identity = 20/54 (37.04%), Postives = 27/54 (50.00%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 555 R AFGKP GT AR+ ++ + C + +EA RRA K +I V R Sbjct: 116 RQAFGKPVGTAARLNKDDIVFTAYCDVEQASVVKEAFRRAYNKLSPPCRITVDR 169 The following BLAST results are available for this feature:
BLAST of CF417077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417077 ID=CF417077; Name=CF417077; organism=Citrus sinensis; type=EST; length=703bpback to top |