CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSI (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica GN=CDKG-2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.342e-34
Identity = 66/198 (33.33%), Postives = 107/198 (54.04%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++++E+L K+ EGTYG VY+A+DK TG++VALKK ++E + EG P T+LRE+++L                     L  ++PS          ++   ++++V EY++ DLK  +++ +     +P   + ++  + QL +GV + H + VLHRDLK  N               GL R +  PLK YT  +VTLWYR
Sbjct:  362 VDEFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINIL---------------------LSFHHPSIVDVKEVVVGSS-LDSIFMVMEYMEHDLKGVMEAMK-----QPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN-LLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYR 531          

HSP 2 Score: 50.0618 bits (118), Expect = 4.342e-34
Identity = 20/31 (64.52%), Postives = 27/31 (87.10%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+LLG+  YSTA+DMWSVGCI AE++ ++
Sbjct:  532 APELLLGTKEYSTAIDMWSVGCIMAELLAKE 562          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.133e-33
Identity = 64/198 (32.32%), Postives = 106/198 (53.54%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +E+++ L ++ EGTYG VY+AKDK T ++VALK+ ++E ++EG P T++RE++ +                     LK+ +P+  +       +N    +Y+V  Y++ DLK  +++ +     +P  P  +++ + QL  GV H H + +LHRDLK  N               GL R +  PLK+YT  +VTLWYR
Sbjct:   76 VEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPLTSIREINTI---------------------LKAQHPNIVTVREIVVGSN-MDKIYIVMNYVEHDLKSLMETMK-----QPFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSN-LLLTHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYR 245          

HSP 2 Score: 48.521 bits (114), Expect = 2.133e-33
Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+LLG+  YSTA DMWSVGCIF E++ ++
Sbjct:  246 APELLLGAKEYSTACDMWSVGCIFGELLTQK 276          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.771e-33
Identity = 69/196 (35.20%), Postives = 104/196 (53.06%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLK-SYTHEIVTLWYR 599
            +EKLE++GEGTYG+VY A++  T ++VALKK R++ + EG P TA+RE+ +L+ L     +        +   + S  P  D        N  K ++Y+VFEY+D DL    D     P  R   P  I+ ++ QL  G+ +CH + VLHRD+K  N               GL R+F+     + T+ ++TLWYR
Sbjct:   25 FEKLEQIGEGTYGQVYMARETETQEIVALKKIRMDNEREGFPITAIREIKILKKLHHQNVI-------QLKEIVTSPGPERDEQGKPIHGNKYKGSIYMVFEYMDHDLTGLADR----PGMRFTVPQ-IKCYMKQLLTGLHYCHINQVLHRDIKGSN-LLIDNEGNLKLADFGLARSFSNDHNGNLTNRVITLWYR 207          

HSP 2 Score: 49.2914 bits (116), Expect = 2.771e-33
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            PE+LLGST Y  AVDMWSVGCIFAE++
Sbjct:  209 PELLLGSTKYGPAVDMWSVGCIFAELL 235          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKC3_ORYSJ (Cyclin-dependent kinase C-3 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.634e-33
Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNN--GKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            + ++ K+GEGTYG+V++A D  TG+  ALKK +L+  +EG P   LRE+ LL+ L     +            LK    SP +A     S++   + ++Y+VFEY+D DLKK +             P+ ++ ++ QL KG+ +CH + VLHRD+K  N               GL R FT    S+T+ ++TLWYR
Sbjct:   27 FRRIRKIGEGTYGEVFEAMDIITGERAALKKIKLDDGKEGFPRQILREIKLLKKLDHENII-----------RLKEIVVSPGTAHGAGGSDDYMYRGDIYMVFEYMDHDLKKVLHHS---------TPSQVKYYMEQLLKGLHYCHVNNVLHRDIKGANLLISGGGKLLKLADFGLARPFTRD-GSFTNHVITLWYR 202          

HSP 2 Score: 48.521 bits (114), Expect = 3.634e-33
Identity = 20/30 (66.67%), Postives = 27/30 (90.00%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            PE+LLG+T+Y+ AVD+WSVGCIFAE + R+
Sbjct:  204 PELLLGATNYAEAVDIWSVGCIFAEFLLRK 233          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.123e-33
Identity = 71/196 (36.22%), Postives = 108/196 (55.10%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVTLWYR 599
            +EKLE++GEGTYG+VY AK+  TG++VALKK R++ + EG P TA+RE+ +L+ L     V++L  +       + +   PD       +N  K  +Y+VFEY+D DL    D     P  R   P  I+ ++ QL  G+ +CH + VLHRD+K  N               GL R+++     + T+ ++TLWYR
Sbjct:   26 FEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHE-NVIQLKEIVTSPGRDRDDQGKPD-------NNKYKGGIYMVFEYMDHDLTGLADR----PGLRFTVPQ-IKCYMKQLLTGLHYCHVNQVLHRDIKGSN-LLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYR 207          

HSP 2 Score: 47.7506 bits (112), Expect = 6.123e-33
Identity = 19/27 (70.37%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            PE+LLG+T Y  A+DMWSVGCIFAE++
Sbjct:  209 PELLLGATKYGPAIDMWSVGCIFAELL 235          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 7.973e-33
Identity = 71/196 (36.22%), Postives = 107/196 (54.59%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVTLWYR 599
            +EKLE++GEGTYG+VY AK+  TG++VALKK R++ + EG P TA+RE+ +L+ L     V+ L  +       + +   PD       +N  K  +Y+VFEY+D DL    D     P  R   P  I+ ++ QL  G+ +CH + VLHRD+K  N               GL R+++     + T+ ++TLWYR
Sbjct:   26 FEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHE-NVIHLKEIVTSPGRDRDDQGKPD-------NNKYKGGIYMVFEYMDHDLTGLADR----PGLRFTVPQ-IKCYMKQLLTGLHYCHVNQVLHRDIKGSN-LLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYR 207          

HSP 2 Score: 47.7506 bits (112), Expect = 7.973e-33
Identity = 19/27 (70.37%), Postives = 24/27 (88.89%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            PE+LLG+T Y  A+DMWSVGCIFAE++
Sbjct:  209 PELLLGATKYGPAIDMWSVGCIFAELL 235          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.874e-32
Identity = 64/198 (32.32%), Postives = 106/198 (53.54%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++++E+L  + EGTYG V++ +DK TG++VALKK ++E + EG P T+LRE+++L                     L  ++PS          +N + ++++V EY++ DLK  +++ +     +P   + ++  + QL +GV + H + VLHRDLK  N               GL R +  PLK YT  +VTLWYR
Sbjct:  346 VDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNIL---------------------LSFHHPSIVEVKEVVVGSNDR-DIFMVMEYMEHDLKGVMETMK-----QPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN-LLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYR 515          

HSP 2 Score: 46.595 bits (109), Expect = 3.874e-32
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            APE+LLG+  YSTA+DMWS+GCI  E++ +
Sbjct:  516 APELLLGAKDYSTAIDMWSLGCIMGELLSK 545          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.874e-32
Identity = 64/198 (32.32%), Postives = 106/198 (53.54%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++++E+L  + EGTYG V++ +DK TG++VALKK ++E + EG P T+LRE+++L                     L  ++PS          +N + ++++V EY++ DLK  +++ +     +P   + ++  + QL +GV + H + VLHRDLK  N               GL R +  PLK YT  +VTLWYR
Sbjct:  346 VDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNIL---------------------LSFHHPSIVEVKEVVVGSNDR-DIFMVMEYMEHDLKGVMETMK-----QPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN-LLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYR 515          

HSP 2 Score: 46.595 bits (109), Expect = 3.874e-32
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            APE+LLG+  YSTA+DMWS+GCI  E++ +
Sbjct:  516 APELLLGAKDYSTAIDMWSLGCIMGELLSK 545          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 88/199 (44.22%), Postives = 112/199 (56.28%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +ME Y KLEK+GEGTY  VYK + K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H D SL                        LVFEYLD DLK+++D          +    ++ FLYQ+ +G+A+CH   VLHRDLKPQN               GL RA +VP K+Y++E+VTLWYR
Sbjct:  188 KMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLE-HEEGAPCTAIREVSLLKDLKHA-NIVTLHDIVHTDKSLT-----------------------LVFEYLDKDLKQYMDDCGS-----IMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQN-LLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYR 355          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 88/199 (44.22%), Postives = 112/199 (56.28%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +ME Y KLEK+GEGTY  VYK + K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H D SL                        LVFEYLD DLK+++D          +    ++ FLYQ+ +G+A+CH   VLHRDLKPQN               GL RA +VP K+Y++E+VTLWYR
Sbjct:  188 KMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLE-HEEGAPCTAIREVSLLKDLKHA-NIVTLHDIVHTDKSLT-----------------------LVFEYLDKDLKQYMDD-----CGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQN-LLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYR 355          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CDKG2_ORYSI4.342e-3433.33Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDK11_RAT2.133e-3332.32Cell division protein kinase 11 OS=Rattus norvegic... [more]
CDKC1_ORYSJ2.771e-3335.20Cyclin-dependent kinase C-1 OS=Oryza sativa subsp.... [more]
CDKC3_ORYSJ3.634e-3334.52Cyclin-dependent kinase C-3 OS=Oryza sativa subsp.... [more]
CDKC1_ARATH6.123e-3336.22Cyclin-dependent kinase C-1 OS=Arabidopsis thalian... [more]
CDKC2_ARATH7.973e-3336.22Cyclin-dependent kinase C-2 OS=Arabidopsis thalian... [more]
CDKG1_ORYSJ3.874e-3232.32Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI3.874e-3232.32Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDK17_RAT5.004e-3244.22Cell division protein kinase 17 OS=Rattus norvegic... [more]
CDK17_MOUSE5.004e-3244.22Cell division protein kinase 17 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
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