CF417202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.077e-61 Identity = 119/177 (67.23%), Postives = 130/177 (73.45%), Query Frame = 2 Query: 68 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAGGP 574 F GK V L+PS +E++ G+ +MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW++ G G LG P L H W MGAVEGYR+AGGP Sbjct: 13 FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPS-------LVHAQSILAIWACQVLLMGAVEGYRVAGGP 182
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 3.367e-61 Identity = 121/187 (64.71%), Postives = 132/187 (70.59%), Query Frame = 2 Query: 68 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAGGPAR*SD*PIVP 604 F G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW + G G LG P L H W MGA+EGYR+AGGP P+ P Sbjct: 13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS-------LVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYP 192 HSP 2 Score: 23.0978 bits (48), Expect = 3.367e-61 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 628 GLADDPEAF 654 GLADDPEAF Sbjct: 200 GLADDPEAF 208
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 9.731e-61 Identity = 119/177 (67.23%), Postives = 129/177 (72.88%), Query Frame = 2 Query: 68 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAGGP 574 F GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW + G G LG P L H W MGAVEGYR+AGGP Sbjct: 13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS-------LVHAQSILAIWACQVVLMGAVEGYRVAGGP 182 HSP 2 Score: 23.0978 bits (48), Expect = 9.731e-61 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 628 GLADDPEAF 654 GLADDPEAF Sbjct: 200 GLADDPEAF 208 HSP 3 Score: 75.485 bits (184), Expect = 2.725e-13 Identity = 44/64 (68.75%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 423 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLY 602 FKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G + E RV G LGEV DPLY Sbjct: 133 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVAG---GPLGEVVDPLY 191
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.654e-60 Identity = 120/175 (68.57%), Postives = 126/175 (72.00%), Query Frame = 2 Query: 74 GKAVNLAPSGNELSNGGRISMRKTGSK--SVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAGGP 574 GKAV L P+ +E+ GRI+MRKT K +V S SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW + G G LG P L H W MGAVEGYRIAGGP Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS-------LVHAQSILAIWACQVILMGAVEGYRIAGGP 182 HSP 2 Score: 23.0978 bits (48), Expect = 1.654e-60 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 628 GLADDPEAF 654 GLADDPEAF Sbjct: 200 GLADDPEAF 208 HSP 3 Score: 75.0998 bits (183), Expect = 3.559e-13 Identity = 43/64 (67.19%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 423 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLY 602 FKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G + E R+ G LGEV DPLY Sbjct: 133 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAV--EGYRIAG---GPLGEVVDPLY 191
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 3.667e-60 Identity = 119/177 (67.23%), Postives = 130/177 (73.45%), Query Frame = 2 Query: 68 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAGGP 574 F GKAVN+ PS ++++ G+ +MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW + G G LG P L H W MGAVEGYR+AGGP Sbjct: 13 FAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS-------LVHAQSILAIWACQVVLMGAVEGYRVAGGP 181 HSP 2 Score: 23.0978 bits (48), Expect = 3.667e-60 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 628 GLADDPEAF 654 GLADDPEAF Sbjct: 199 GLADDPEAF 207 HSP 3 Score: 75.0998 bits (183), Expect = 3.559e-13 Identity = 44/64 (68.75%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 423 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLY 602 FKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA L G + E RV G LGEV DPLY Sbjct: 132 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVAG---GPLGEVIDPLY 190
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.117e-60 Identity = 118/176 (67.05%), Postives = 127/176 (72.16%), Query Frame = 2 Query: 68 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAG-GP 574 F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW + G G LG P L H W MGAVEGYR+AG GP Sbjct: 13 FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS-------LVHAQSILAIWATQVILMGAVEGYRVAGEGP 181
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.802e-59 Identity = 117/177 (66.10%), Postives = 130/177 (73.45%), Query Frame = 2 Query: 68 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAGGP 574 F GKAVN+ PS +E++ G+++MRKT +K+ VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFGEAVW + G + G LG P L H W MGAVEGYR+AGGP Sbjct: 13 FAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPS-------LVHAQSILAIWACQVVLMGAVEGYRVAGGP 181 HSP 2 Score: 23.0978 bits (48), Expect = 1.802e-59 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 628 GLADDPEAF 654 GLADDPEAF Sbjct: 199 GLADDPEAF 207 HSP 3 Score: 73.559 bits (179), Expect = 1.036e-12 Identity = 43/64 (67.19%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 423 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLY 602 FKAG+QIF EGGLDYLGNPSL+HAQSILAIWA L G + E RV G LGEV DPLY Sbjct: 132 FKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVAG---GPLGEVIDPLY 190
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 7.389e-59 Identity = 115/177 (64.97%), Postives = 127/177 (71.75%), Query Frame = 2 Query: 68 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAGGP 574 F GKAV L+ S +E++ G+++MRKT +K+ SS SPWYG DRVKYLGPFSGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEAVW + G G LG P L H W MGAVEGYR+AGGP Sbjct: 13 FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPS-------LVHAQSILAIWACQVVLMGAVEGYRVAGGP 182 HSP 2 Score: 76.2554 bits (186), Expect = 6.318e-14 Identity = 45/64 (70.31%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 423 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLY 602 FKAGAQIFSEGGLDYLGNPSL+HAQSILAIWA L G + E RV G LGEV DPLY Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV--EGYRVAG---GPLGEVIDPLY 191 HSP 3 Score: 21.557 bits (44), Expect = 6.318e-14 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 628 GLADDPEAF 654 GLA+DPEAF Sbjct: 200 GLAEDPEAF 208
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 7.389e-59 Identity = 116/167 (69.46%), Postives = 125/167 (74.85%), Query Frame = 2 Query: 74 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSWMGAVEGYRIAGGP 574 GKAV +APS +EL GR+SMRKT VS SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVW + G G LG P + + + + MGAVEGYR+AGGP Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL-VHAQSILSIWATQVILMGAVEGYRVAGGP 179 HSP 2 Score: 73.9442 bits (180), Expect = 7.929e-13 Identity = 42/64 (65.62%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 423 FKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA----LPGGLGWEPLRVTELLEGRLGEVTDPLY 602 FKAG+QIFSEGGLDYLGNPSL+HAQSIL+IWA L G + E RV G LGE+ DPLY Sbjct: 130 FKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAV--EGYRVAG---GPLGEIVDPLY 188
BLAST of CF417202 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.667e-58 Identity = 118/177 (66.67%), Postives = 128/177 (72.32%), Query Frame = 2 Query: 68 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWVQGGGPDLQRGRA*LLGEPKPDPRPEHLGHLGFARWSW------MGAVEGYRIAG-GP 574 F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVW + G G LG P L H W MGAVEGYR+AG GP Sbjct: 13 FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS-------LVHAQSILAIWATQVILMGAVEGYRVAGNGP 182 The following BLAST results are available for this feature:
BLAST of CF417202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417202 ID=CF417202; Name=CF417202; organism=Citrus sinensis; type=EST; length=655bpback to top |