CF417210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METJA (30S ribosomal protein S15P/S13e OS=Methanocaldococcus jannaschii GN=rps15p PE=3 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 4.495e-29 Identity = 62/126 (49.21%), Postives = 88/126 (69.84%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 W++ + + VE + + AKKG +QIG+ILRD++GI VK +TG KI +I+K HGL P++PEDL +L+++AV +RKHLE++ KD SK L L+ES+I RL +YYK LP W+Y TA LV Sbjct: 25 WVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGIPDVKLITGKKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIESKIRRLVKYYKSKGVLPADWRYTPETARLLV 150
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_PYRIL (30S ribosomal protein S15P/S13e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps15p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 62/126 (49.21%), Postives = 87/126 (69.05%), Query Frame = 2 Query: 2 SWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 379 +W++ + +VE + + A++G PSQIG+ILRD +GI VK +TG K+ +IL+ HG+ EIPEDL +LIK+A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ KLP + Y S L Sbjct: 24 TWIQYTPDEVEQLVVELARRGFPPSQIGIILRDQYGIPLVKPITGKKLTKILEEHGIRQEIPEDLLNLIKRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKYYKRVGKLPKEFVYNPEALSHL 149
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_PYRAE (30S ribosomal protein S15P/S13e OS=Pyrobaculum aerophilum GN=rps15p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.001e-28 Identity = 60/126 (47.62%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 2 SWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 379 +W++ + ++VE + + A++G PSQIG+ILRD +GI V+ +TG K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ KLPP + Y S L Sbjct: 24 TWIQYTPEEVEQLVVELARRGFQPSQIGLILRDQYGIPLVRPITGKKLTKILEEHGIKYELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLVKYYKRVGKLPPDFVYNPQALSHL 149
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_IGNH4 (30S ribosomal protein S15P/S13e OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps15p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.001e-28 Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 W+ ++++ I + +KKG PS IG+ILRD G+ VK + G K+++I++ G+AP IPEDL+HL+K+AV +R HL + KDK S L+ +ES+I RL +YYK+ KLPP WKY+ A LV Sbjct: 23 WVPFGPEEIKALIVELSKKGYGPSMIGIILRDQFGVPLVKPIVGKKLVKIMEEQGVAPPIPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKIRRLVKYYKRVGKLPPDWKYDPERARLLV 148
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_PYRAR (30S ribosomal protein S15P/S13e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps15p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.231e-28 Identity = 59/126 (46.83%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 2 SWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 379 +W++ + ++VE + A++G PSQIG++LRD +GI VKS+TG K++++L+ HG+ EIPEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ +LP + Y S L Sbjct: 27 TWIQYTPEEVEQLAVELARRGFQPSQIGIVLRDQYGIPLVKSITGKKLVKVLEEHGIKYEIPEDLLNLIRRALRIRKHLEEHPKDMSSRRGLQLVESKIHRLIKYYKRVGRLPRDFVYNPQALSHL 152
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_PYRCJ (30S ribosomal protein S15P/S13e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps15p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.477e-28 Identity = 59/126 (46.83%), Postives = 87/126 (69.05%), Query Frame = 2 Query: 2 SWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 379 +W++ + ++VE + A++G PSQIG+ILRD +GI VK +TG K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ K+P + Y S L Sbjct: 24 TWIQYTPEEVEQLAVELARRGFPPSQIGIILRDQYGIPLVKPITGKKLTKILEEHGIKQELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKYYKRVGKIPQDFVYNPEALSHL 149
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METTH (30S ribosomal protein S15P/S13e OS=Methanobacterium thermoautotrophicum GN=rps15p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.107e-27 Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 W++ S++++ED I K ++G + S+IG+ILRD HGI VK+VTG KI +IL+ H + PE PEDL +LI+KAV IR HL+ + KD ++ L +VES+I RL RYY + LP W+Y+ A+ LV Sbjct: 8 WVEYSNEEIEDLIVKLYREGNSTSKIGIILRDQHGIPSVKAVTGLKITQILEKHEMKPEYPEDLMNLIRKAVNIRDHLKEHPKDLHTRRGLQIVESKIRRLVRYYVREGVLPEGWRYDPQKAALLV 133
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METS5 (30S ribosomal protein S15P/S13e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps15p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.107e-27 Identity = 60/127 (47.24%), Postives = 86/127 (67.72%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 385 W++ S ++VE I + AKKG TPS IG++LRD +GI K + G K+ + LK GLA +IPEDL++LI++AV +R+HL DK +K L +ES+I RL+RYYK+ +KLP W Y+ A LV+ Sbjct: 23 WVRFSREEVEMLIEELAKKGYTPSMIGIVLRDQYGIPLAKPIIGKKVNQFLKDKGLASQIPEDLFNLIRRAVNVRRHLNEYPGDKTAKKGLEEIESKIRRLSRYYKRVEKLPQDWTYDPAKAELLVS 149
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_CALMQ (30S ribosomal protein S15P/S13e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps15p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.888e-27 Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 355 WL S +DVE + + A++G TPS IGVILRD +GI VK VT +I IL+ +GL P+IPEDL LI++AV IR+HLE + KD +K L+L ES+IHRL +YYK+T LP + Y Sbjct: 25 WLSYSPEDVERLVVELARRGFTPSLIGVILRDQYGIPLVKIVTNKRITEILEENGLKPQIPEDLMALIRRAVNIRRHLEEHPKDMSAKKGLLLTESKIHRLIKYYKRTGVLPLDFTY 141
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METST (30S ribosomal protein S15P/S13e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps15p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.221e-27 Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 W++ S +++E+ I K K+G + SQIG+ LRD HGI K+V G KI ILK +G E PEDL +LIK+AV IR+HLE N KD +K LI +ES+I RL +YY + LP W+Y+ TA+ LV Sbjct: 7 WVEQSPEEIEELIVKLHKEGQSTSQIGITLRDQHGIPNTKAVLGEKITDILKRNGTDFEYPEDLLNLIKRAVNIREHLEENPKDIHTKRGLIKIESKIRRLVKYYTRNNVLPEGWRYDPKTAALLV 132 The following BLAST results are available for this feature:
BLAST of CF417210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417210 ID=CF417210; Name=CF417210; organism=Citrus sinensis; type=EST; length=643bpback to top |