CF417210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_HALWD (30S ribosomal protein S15P/S13e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps15p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.364e-16 Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK 322 W I + +E+ + + A++G PSQIG+ LRD I VK T K+ IL+ H PE+PEDL +L+++A+ +R+H++ N +D +K L ES+I RLA YY+ Sbjct: 25 WSDIDADAIEERVVELAEQGHEPSQIGMKLRDEGVKGTPIPDVKLATDKKVTTILEEHNAKPELPEDLRNLMERAIRLRRHVDENGQDMQNKRALQNTESKIRRLASYYR 134
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_NATPD (30S ribosomal protein S15P/S13e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps15p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.658e-15 Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTK 331 W ++ +ED + + A++G PSQIG+ LRD + VK TG K+ IL+ + E+PEDL +L+++A+ +R+H++RN D +K L ES+I RL YY+ K Sbjct: 25 WSEVDEDAIEDRVVELAEEGYDPSQIGLKLRDEGVQGVPVPDVKLATGKKVTEILEENDAENELPEDLRNLMERAIRLREHMDRNPGDAQNKRALQNTESKIRRLVDYYRGDK 137
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_HALMA (30S ribosomal protein S15P/S13e OS=Haloarcula marismortui GN=rps15p PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK 322 W + +E + + A++G +PS+IG+ LRD I V TG K+ IL+ + P++PEDL +L+++AV +R H++ N D +K L +S+I RL YY+ Sbjct: 25 WSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTPIPDVSLATGKKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQNTQSKIRRLIDYYR 134 The following BLAST results are available for this feature:
BLAST of CF417210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417210 ID=CF417210; Name=CF417210; organism=Citrus sinensis; type=EST; length=643bpback to top |