CF503803

Overview
NameCF503803
Unique NameCF503803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length295
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:147..441. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.816e-28
Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 2
Query:   68 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            QVI CKAAVAWE  KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG +P ILGHE AGIVESVGEG
Sbjct:    4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEG 79          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 1.163e-27
Identity = 58/76 (76.32%), Postives = 64/76 (84.21%), Query Frame = 2
Query:   68 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            +VI CKAAVAWE  KPL IE+++VAPP+A EVRIKI  TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEG
Sbjct:    4 KVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIFATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEG 79          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.163e-27
Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 2
Query:   68 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            +VI CKAAVAWE  KP+ IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEG
Sbjct:    4 EVIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEG 79          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.163e-27
Identity = 58/81 (71.60%), Postives = 65/81 (80.25%), Query Frame = 2
Query:   53 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            M+T G+VI CKAAVAWE  KPL IE+V+VAPPQA EVR+KIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEG
Sbjct:    1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEG 81          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.163e-27
Identity = 58/81 (71.60%), Postives = 65/81 (80.25%), Query Frame = 2
Query:   53 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            M+T G+VI CKAAVAWE  KPL IE+V+VAPPQA EVR+KIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEG
Sbjct:    1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEG 81          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.163e-27
Identity = 58/81 (71.60%), Postives = 65/81 (80.25%), Query Frame = 2
Query:   53 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            M+T G+VI CKAAVAWE  KPL IE+V+VAPPQA EVR+KIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEG
Sbjct:    1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEG 81          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.163e-27
Identity = 58/81 (71.60%), Postives = 65/81 (80.25%), Query Frame = 2
Query:   53 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            M+T G+VI CKAAVAWE  KPLVIE+V+VAPPQA EVR+KILFT+LCHTD Y W  K    +FP I GHEA GIVESVGEG
Sbjct:    1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEG 81          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.163e-27
Identity = 58/81 (71.60%), Postives = 65/81 (80.25%), Query Frame = 2
Query:   53 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            M+T G+VI CKAAVAWE  KPLVIE+V+VAPPQA EVR+KILFT+LCHTD Y W  K    +FP I GHEA GIVESVGEG
Sbjct:    1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEG 81          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.518e-27
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 2
Query:   53 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            MSTEGQ+I CKAAVAWE  K L IE+++V PP+A EVR+K+ FT +CHTDAYT SG D EG FP + GHE AG+VESVGEG
Sbjct:    1 MSTEGQIIKCKAAVAWEAGKDLSIEEIEVLPPRAHEVRVKVEFTGVCHTDAYTLSGADAEGSFPVVFGHEGAGVVESVGEG 81          
BLAST of CF503803 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.518e-27
Identity = 57/80 (71.25%), Postives = 64/80 (80.00%), Query Frame = 2
Query:   56 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 295
            STEG+VI C+AAVAWE  KPLVIE+V+VAPPQA  VR+KIL+T+LCHTD Y W  K    LFP I GHEA GIVESVGEG
Sbjct:    3 STEGKVICCRAAVAWEAGKPLVIEEVEVAPPQANVVRVKILYTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEG 82          
The following BLAST results are available for this feature:
BLAST of CF503803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
ADHX_BOVIN6.816e-2877.63Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_RABIT1.163e-2776.32Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_HORSE1.163e-2776.32Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADH3_HORVU1.163e-2771.60Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH2_ORYSJ1.163e-2771.60Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI1.163e-2771.60Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH1_ORYSJ1.163e-2771.60Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI1.163e-2771.60Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
FADH_PICPA1.518e-2767.90S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH_FRAAN1.518e-2771.25Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-289 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503803 ID=CF503803; Name=CF503803; organism=Citrus sinensis; type=EST; length=295bp
CTCGTTTCTTTTTGTGGTCTGTTTTTCATTCTCATTTTCATTGTCAGCAG
CCATGTCTACTGAAGGTCAAGTCATCACATGCAAAGCGGCGGTGGCCTGG
GAACCCAACAAGCCATTGGTGATTGAGGATGTGCAGGTTGCTCCGCCTCA
GGCTGGCGAGGTCCGAATCAAGATTCTCTTCACTGCTCTCTGCCACACTG
ATGCTTACACCTGGAGCGGCAAGGATCCTGAAGGTCTCTTCCCTTGTATC
CTAGGTCATGAGGCTGCTGGGATTGTGGAGAGTGTTGGTGAAGGT
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