CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.832e-34
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPT AAIAYGLDKKGGE+N+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++++F    K+KH
Sbjct:  163 DAGAIAGLNVLRIINEPTRAAIAYGLDKKGGERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVDHFTAEFKRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKH 249          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_ACHKL4.832e-3474.16Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP71_RAT6.311e-3474.44Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HSP71_PONAB6.311e-3474.44Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN6.311e-3474.44Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP71_CANFA6.311e-3474.44Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71B_PIG6.311e-3474.44Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HS71B_MOUSE6.311e-3474.44Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71B_BOVIN6.311e-3474.44Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71A_PIG6.311e-3474.44Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HS71A_MOUSE6.311e-3474.44Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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