CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 6.311e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.242e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDK-KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDK K GE+N+L+FDLGGGTFDVSILTI++G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  162 DAGVIAGLNVQRIINEPTAAAIAYGLDKGKSGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMVNHFVEEFKRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.242e-34
Identity = 66/89 (74.16%), Postives = 79/89 (88.76%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKKGGE+N+L+FDLGGGTFDVS+L+I+ G+FEV ST  DTHLGGEDFD R++++F +  K+KH
Sbjct:  163 DAGAIAGLNVLRIINEPTAAAIAYGLDKKGGERNVLIFDLGGGTFDVSLLSIEEGIFEVKSTARDTHLGGEDFDNRLVDHFTQEFKRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.242e-34
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVEATAGDTHLGGEDFDNRLVNHFVEEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.076e-33
Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKKG GE+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +F    K+KH
Sbjct:  161 DAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKH 250          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.076e-33
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDK G GE+++L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  162 DAGVIAGLNVLRIINEPTAAAIAYGLDKAGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 1.406e-33
Identity = 68/90 (75.56%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKK  GE+N+L+FDLGGGTFDVSIL+ID+G+FEV ST GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.406e-33
Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+KH
Sbjct:  160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.406e-33
Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+KH
Sbjct:  160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 1.406e-33
Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+KH
Sbjct:  160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71A_BOVIN6.311e-3474.44Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP71_ORYLA8.242e-3474.44Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_BRELC8.242e-3474.16Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HS71B_BOSMU8.242e-3474.44Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HSP7A_CAEEL1.076e-3376.67Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HS71L_PIG1.076e-3374.44Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HSP7D_DROME1.406e-3375.56Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP7C_SAGOE1.406e-3376.67Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT1.406e-3376.67Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB1.406e-3376.67Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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