CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.398e-33
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I+GLNV RIINEPTAAAIAYGLDKKG GE+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +F++  K+K+
Sbjct:  160 DAGTISGLNVLRIINEPTAAAIAYGLDKKGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKY 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.398e-33
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK  GE+N+L+FDLGGGTFDVS+LTI+ G+FEV ST GDTHLGGEDFD R++ +F+   K+KH
Sbjct:   28 DAGLIAGLNVLRIINEPTAAAIAYGLDKKTEGERNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVNEFKRKH 117          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.398e-33
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK G EKN+L+FDLGGGTFDVSIL I++G+FE+ ST GDTHLGGEDFD R++ +F+   K+KH
Sbjct:  160 DAGVIAGLNVLRIINEPTAAAIAYGLDKKVGTEKNVLIFDLGGGTFDVSILAIEDGIFEIKSTAGDTHLGGEDFDNRLVNHFVDEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 4.091e-33
Identity = 66/91 (72.53%), Postives = 81/91 (89.01%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLD++G GE+N+L+FDLGGGTFDVS+L+ID GVFEV +T GDTHLGGEDFD R++ +F++  ++KHG
Sbjct:  162 DAGAIAGLNVLRIINEPTAAAIAYGLDRRGAGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHG 252          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.091e-33
Identity = 69/92 (75.00%), Postives = 78/92 (84.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I GLNV RIINEPTAAAIAYGLDKKG   GEKN+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++  F++  K KH
Sbjct:  161 DAGTITGLNVMRIINEPTAAAIAYGLDKKGTRAGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNRFVEEFKGKH 252          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.342e-33
Identity = 66/92 (71.74%), Postives = 79/92 (85.87%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+I+GLNV RIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F+   K+KH
Sbjct:  164 DAGVISGLNVMRIINEPTAAAIAYGLDKKATSAGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVHEFKRKH 255          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.342e-33
Identity = 65/90 (72.22%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG++AGLN+ RIINEPTAAAIAYGLDK   GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  161 DAGVLAGLNILRIINEPTAAAIAYGLDKGARGEQNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRMVNHFVEEFKRKH 250          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 66/90 (73.33%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLD++G GE+N+L+FDLGGGTFDVS+LTID GVFEV +T GDTHLGGEDFD R++ +F++  ++KH
Sbjct:  162 DAGAIAGLNVLRIINEPTAAAIAYGLDRRGAGERNVLIFDLGGGTFDVSVLTIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I GLNV RIINEPTAAAIAYGLDKKG   GEKN+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +  +  K+KH
Sbjct:  161 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKH 252          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I GLNV RIINEPTAAAIAYGLDKKG   GEKN+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +  +  K+KH
Sbjct:  161 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKH 252          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7D_MANSE2.398e-3374.44Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP70_PENCI2.398e-3374.44Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_HYDMA2.398e-3374.44Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP76_HUMAN4.091e-3372.53Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP70_CHICK4.091e-3375.00Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP71_SOLLC5.342e-3371.74Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_XENLA5.342e-3372.22Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP76_PIG6.977e-3373.33Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP72_RAT6.977e-3373.91Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_HUMAN6.977e-3373.91Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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