CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.113e-33
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAGIIAGLNV RI+NEPTAAAIAYGLD    EK I+V+DLGGGTFDVS+L+I++GVFEVL+T GDTHLGGEDFD RV+++F+K   KKH
Sbjct:  193 DAGIIAGLNVLRIVNEPTAAAIAYGLDHTDDEKQIVVYDLGGGTFDVSLLSIESGVFEVLATAGDTHLGGEDFDYRVIKHFVKQYNKKH 281          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 1.190e-32
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKK 265
            DAG+IAGLNV RIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++  K+K
Sbjct:  164 DAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRK 254          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.190e-32
Identity = 66/91 (72.53%), Postives = 79/91 (86.81%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG--GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKK   GEKN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLG EDFD R++ +F++  K+KH
Sbjct:  163 DAGAIAGLNVLRIINEPTAAAIAYGLDKKAEAGEKNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGAEDFDNRLVNHFVQEFKRKH 253          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.190e-32
Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKK 265
            DAG+IAGLNV RIINEPTAAAIAYGLDKK  GE+N+L+FDLGGGTFDVS+LTI+ G+FEV ST GDTHLGGEDFD R++ +F+   K+K
Sbjct:  158 DAGLIAGLNVLRIINEPTAAAIAYGLDKKADGERNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVSEFKRK 246          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.190e-32
Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RI+NEPTAAAIAYGLDK  GEK I+V+DLGGGTFDVS+L+I+ GVFEVL+T GDTHLGGEDFD +V+ Y   + KKKH
Sbjct:  205 DAGTIAGLNVLRIVNEPTAAAIAYGLDKTEGEKQIIVYDLGGGTFDVSLLSIEGGVFEVLATAGDTHLGGEDFDFKVVRYLSSVFKKKH 293          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.190e-32
Identity = 64/90 (71.11%), Postives = 78/90 (86.67%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLN+ RI+NEPTAAAIAYGLDK   E  I+V+DLGGGTFDVS+L+I+NGVFEV +T GDTHLGGEDFD +++ +F+K+ KKKHG
Sbjct:  203 DAGAIAGLNILRIVNEPTAAAIAYGLDKTEDEHRIVVYDLGGGTFDVSLLSIENGVFEVQATAGDTHLGGEDFDYKLVRHFLKVFKKKHG 292          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.554e-32
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I+GLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+K+
Sbjct:  160 DAGTISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKY 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.554e-32
Identity = 66/90 (73.33%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I+GLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++G+F++ ST GDTHLGGEDFD R++ +FI   K+KH
Sbjct:  160 DAGTISGLNVLRIINEPTAAAIAYGLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.554e-32
Identity = 66/90 (73.33%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAGII+GLNV RIINEPTAAAIAYGLDKK  GEKN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++  K+K+
Sbjct:  158 DAGIISGLNVMRIINEPTAAAIAYGLDKKTEGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKN 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.554e-32
Identity = 67/92 (72.83%), Postives = 78/92 (84.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I GLNV RIINEPTAAAIAYGLDKKG   GEKN+L+FDLGGGTFDVSILTI++G+FE+ ST GDTHLGGEDFD R++ +  +  K+KH
Sbjct:  161 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFELKSTAGDTHLGGEDFDNRMVSHLAEEFKRKH 252          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_YARLI9.113e-3374.1678 kDa glucose-regulated protein homolog OS=Yarrow... [more]
HSP71_ARATH1.190e-3272.53Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP70_BLAEM1.190e-3272.53Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP70_AJECA1.190e-3274.16Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
GRP78_DEBHA1.190e-3274.1678 kDa glucose-regulated protein homolog OS=Debary... [more]
GRP78_ASHGO1.190e-3271.1178 kDa glucose-regulated protein homolog OS=Ashbya... [more]
HSP7C_ORYLA1.554e-3274.44Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP7C_ICTPU1.554e-3273.33Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP72_USTMA1.554e-3273.33Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP72_MOUSE1.554e-3272.83Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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