CF503807

Overview
NameCF503807
Unique NameCF503807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length282
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5604 contig Csv1_Contig5604:7..287. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503807 vs. ExPASy Swiss-Prot
Match: DAD1_XENLA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1 OS=Xenopus laevis GN=dad1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.155e-14
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   91 AATPTTLKIIDLYVGFAVFTSVIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDN 282
            ++TP  LK++D Y+ + + T  +Q +Y  +VG+FPFNSFLSG +S VG+ +LAVCLRIQ+N  N
Sbjct:   18 SSTPQRLKLLDAYLLYILLTGALQFLYCLLVGTFPFNSFLSGFISSVGSFILAVCLRIQINPQN 81          
BLAST of CF503807 vs. ExPASy Swiss-Prot
Match: DAD1_CAEEL (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad-1 OS=Caenorhabditis elegans GN=dad-1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.082e-13
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 1
Query:   97 TPTTLKIIDLYVGFAVFTSVIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDN 282
            T + LKIID Y+ + +FT + Q +Y  +VG+FPFNSFLSG +S V + VLA CLR+QVN++N
Sbjct:   20 TSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFISTVTSFVLASCLRMQVNQEN 81          
BLAST of CF503807 vs. ExPASy Swiss-Prot
Match: DAD1_PONAB (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Pongo abelii GN=DAD1 PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 2.719e-13
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 1
Query:   76 LRSAYAATPTTLKIIDLYVGFAVFTSVIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDN 282
            L    ++TP  LK++D Y+ + + T  +Q  Y  +VG+FPFNSFLSG +SCVG+ +LAV LRIQ+N  N
Sbjct:   13 LEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFISCVGSFILAVRLRIQINPQN 81          
BLAST of CF503807 vs. ExPASy Swiss-Prot
Match: DAD1_DICDI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Dictyostelium discoideum GN=ost2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.910e-13
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   61 ALFHSLRSAYAATPTTLKIIDLYVGFAVFTSVIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDN 282
            ++  S   +Y+ TP  LKIIDL++ +   T VI   Y  +VG++PFNSFL+  +S VG  VL VCLRIQ+N  N
Sbjct:   16 SIVKSFFESYSKTPQKLKIIDLFLIYTFITGVIVFTYCCLVGTYPFNSFLAAFISTVGCFVLTVCLRIQINPIN 89          
BLAST of CF503807 vs. ExPASy Swiss-Prot
Match: DAD1_CHICK (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Gallus gallus GN=DAD1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.746e-12
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1
Query:   91 AATPTTLKIIDLYVGFAVFTSVIQVVYMAIVGSFPFNSFLSGVLSCVGTAVLAVCLRIQVNKDN 282
            + T + LK++D Y+ + + T  +Q  Y   VG+FPFNSFLSG +S VG+ +L VCLRIQ+N  N
Sbjct:   28 SGTSSRLKVLDAYLLYVMLTGALQFGYCLGVGTFPFNSFLSGFISAVGSFILGVCLRIQINPQN 91          
The following BLAST results are available for this feature:
BLAST of CF503807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DAD1_XENLA7.155e-1451.56Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
DAD1_CAEEL2.082e-1354.84Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
DAD1_PONAB2.719e-1349.28Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
DAD1_DICDI7.910e-1347.30Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
DAD1_CHICK8.746e-1248.44Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-293 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503807 ID=CF503807; Name=CF503807; organism=Citrus sinensis; type=EST; length=282bp
CAGAGAGAAAGACAGATTACAGAGAGGAAATGGCGAGATCGACCGGCAAA
GACGCCTCAAGCCCTTTTCCATTCCCTTCGCTCTGCTTATGCTGCCACTC
CCACGACTCTTAAGATCATCGATCTGTATGTGGGTTTCGCGGTTTTTACT
TCCGTAATTCAGGTAGTTTACATGGCTATTGTTGGATCCTTCCCATTCAA
CTCTTTTCTTTCAGGAGTACTTTCTTGTGTTGGGACGGCAGTCCTTGCTG
TTTGTCTACGTATTCAAGTGAACAAGGACAAC
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