CF503813

Overview
NameCF503813
Unique NameCF503813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5211 contig Csv1_Contig5211:47..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.631e-23
Identity = 55/164 (33.54%), Postives = 93/164 (56.71%), Query Frame = 3
Query:    3 KVKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGE 494
            K+KP            F E++LK M   +  +P IFA+S+PT  AEC+A + +K      +FASGSPF+ V L +G+     Q NN Y+FPG+ LG +  G R I D +     E ++  ++D+ + +G LYP +++IR ++ ++   +++ A +E +A  + E
Sbjct:  370 KIKPTALIGVAAIGGAFTEQILKDMAAFNE-RPIIFALSSPTSKAECSADECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHIDDKVFLTTREVISQQVSDKHLQEGRLYPPLNTIRGVSLKIAVKIVQDAYKEKMATVYPE 532          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.131e-23
Identity = 55/135 (40.74%), Postives = 85/135 (62.96%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLR 455
            FNEEV++AM E +  +P IFA+SNPT  AECTA +A+       ++ASGSPF N +L NG      Q NN Y+FPG+ LGT+L   R + + +   AA+ +AS +T++ +  G +YP +  IR+I+ ++   + +
Sbjct:  450 FNEEVIRAMAEINE-RPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFEL-NGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAK 582          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.747e-23
Identity = 54/158 (34.18%), Postives = 87/158 (55.06%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            +KP            F +E+L+ M   +  +P IFA+SNPT  AECTA   +K+     +FASGSPF+ V L NGK  +  Q NN Y+FPG+ LG +  G + I + +    AE +A  +++E + +G LYP + +I+ ++ ++   +   A   + A
Sbjct:  360 IKPSVLIGVAAIGGAFTKEILQDMAAFNK-RPIIFALSNPTSKAECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFPGVALGVIACGLKHIGEDVFLTTAEVIAEQVSEENLQEGRLYPPLVTIQHVSLKIAVRIAEEAYRNNTA 516          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.747e-23
Identity = 62/159 (38.99%), Postives = 88/159 (55.35%), Query Frame = 3
Query:    3 KVKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            K+KP            FN+E+L  +  S   KP IF +SNPT  +ECTA +A +    N++FASGSPF+ V+   GK    NQ NN Y FPGIGLG + S A  +     Q  A  +AS  T E +  G ++P +D++R ++ EVG  V + A   ++A
Sbjct:  405 KIKPTCLLGLSTCPKLFNKEMLSYVA-SYCEKPGIFPLSNPTSRSECTAEEAVEFTDGNLIFASGSPFDPVEW-KGKTIQTNQCNNSYSFPGIGLGLVSSRATRVPFETFQVCARVIASLGTPEMLATGKIFPDLDNLRAVSLEVGIEVAKMAERMNIA 561          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.381e-22
Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGE 494
            F EE++K M  S   +P I  MSNPT  AE    D FK     ++ A+GSPF+NV+  NG    + Q+NN + FPG+GLG++++ AR IT  M    A+ +A  M D E P   L PSID +++++ +V  AV  AA+++ +A    E
Sbjct:  417 FTEEIVKEMA-SHVDRPVIMPMSNPTHLAEAVPEDLFKWTDGKVLIATGSPFDNVEY-NGVSYEIGQSNNAFAFPGLGLGSIVAEARIITPAMFAATADAIAE-MVDLETPGAGLLPSIDKLQEVSIQVAIAVAEAAIKDGVANRQPE 561          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.018e-22
Identity = 52/158 (32.91%), Postives = 88/158 (55.70%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            +KP            F +++L+ M   +  +P IFA+SNPT  AECTA   +K+     +FASGSPF+ V L +G+  +  Q NN Y+FPG+ LG +  G + I D +    AE +A  +++E + +G LYP + +I+ ++ ++   + + A   + A
Sbjct:  360 IKPTVLIGVAAIGGAFTQQILQDMAAFNK-RPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTA 516          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.688e-20
Identity = 51/143 (35.66%), Postives = 83/143 (58.04%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F EEV++ + E+   +P +  +SNPT   E   +D  +      + A+GSPF  V+   GK+ +++Q NN Y+FPGIGLG + SGA+ +TD ML  ++  LA      + P   L P+I  I+D++  +   V +AA+E+ +A
Sbjct:  397 FTEEVIRTLAENCE-RPIVMPLSNPTSRVEALPSDVIQWTNGRALIATGSPFAPVNY-QGKLYNISQCNNSYIFPGIGLGVIASGAKRVTDNMLMASSNALADCSPLLQNPNADLLPAIADIQDVSKRIAFKVAKAAIEDGVA 537          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.415e-20
Identity = 54/143 (37.76%), Postives = 81/143 (56.64%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F EE++KAM  S   +P +F +SNPT   E T  D         + A+GSPFE V + NG+   + Q NN ++FPGIGLG L  GAR ++D ML  ++  LA      +   G L P ++ I+ ++  +  AV +AA+++ LA
Sbjct:  393 FTEEIIKAMH-SHCKRPIVFPLSNPTSRVEATPKDILNWTSGQALVATGSPFEPV-IVNGETFEIAQCNNSFIFPGIGLGVLSCGARRVSDEMLMASSRALAECSPLGKDGVGSLLPRLEDIQTVSKYIAFAVAKAAIDQGLA 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.379e-20
Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEE 470
            F+EE++KAM +    +P +F +SNPT   E T  D         + A+GSPFE V L NG+   + Q NN Y+FPGIGLG L +GA+ ++D ML  ++  LA         +G L P ++ I  ++  +  AV + AVE+
Sbjct:  393 FSEEIIKAMHQH-CPRPIVFPLSNPTSRVEATPKDVLHWTNGQALVATGSPFEPVAL-NGETFEIAQCNNSYIFPGIGLGVLSAGAKRVSDEMLMASSRALAECSPLALNGEGPLLPPLEEIHQVSKHIAFAVAKVAVEQ 530          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_BDEBA (NAD-dependent malic enzyme OS=Bdellovibrio bacteriovorus GN=sfcA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.379e-20
Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F EEV++ M +S    P +  +SNPT   E T AD  +      + A+GSPF  V + N +I  + Q NN Y+FPGIGLG L  GAR +TD ML  A+  LA      +  KG L P +  I  ++  +  AV +AA  +++A
Sbjct:  396 FTEEVIRTM-QSHCEHPIVMPLSNPTSRVEATPADILRWTDGKALVATGSPFMPVHM-NDQIYPIAQCNNSYIFPGIGLGVLACGARRVTDSMLMAASSALADCSPLAQNGKGALLPELSQIEKVSRTIAFAVAKAAQADEVA 536          
The following BLAST results are available for this feature:
BLAST of CF503813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_MOUSE1.631e-2333.54NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOM_ASCSU2.131e-2340.74NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]
MAOX_ANAPL4.747e-2334.18NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOH_NEOFR4.747e-2338.99Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO2_BACSU1.381e-2239.86Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAOX_COLLI4.018e-2232.91NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAO1_ACIAD1.688e-2035.66NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_SHEFN6.415e-2037.76NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_SHEWM8.379e-2037.86NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO1_BDEBA8.379e-2038.46NAD-dependent malic enzyme OS=Bdellovibrio bacteri... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-299 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503813 ID=CF503813; Name=CF503813; organism=Citrus sinensis; type=EST; length=501bp
GAAAGGTCAAACCCCATGTGCTTCTTGGTTTGTCTGGCGTAGGTGGTGTC
TTCAATGAAGAGGTGCTTAAGGCTATGCGAGAGTCTGATTCTGTCAAACC
TGCCATTTTTGCTATGTCAAATCCGACCATGAATGCTGAATGCACTGCTG
CTGATGCTTTTAAGCATGCTGGGGAAAATATAGTGTTTGCTAGTGGAAGT
CCTTTTGAGAATGTTGATCTGGGAAATGGGAAAATAGGCCATGTAAATCA
AGCAAATAACATGTATCTGTTCCCTGGGATTGGTTTGGGAACTCTCCTTT
CAGGTGCTCGTTTTATAACAGATGGAATGTTACAACAAGCTGCAGAATGC
CTTGCGTCCTATATGACCGATGAGGAAATTCCAAAAGGCATTCTGTATCC
ATCTATTGACAGTATTCGAGATATTACGGCAGAAGTTGGAGCAGCTGTTC
TACGAGCAGCAGTTGAGGAAGACTTGGCAGAAGGTCATGGTGAAGTTGGT
C
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