CF503813

Overview
NameCF503813
Unique NameCF503813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5211 contig Csv1_Contig5211:47..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_VIBCH (NAD-dependent malic enzyme OS=Vibrio cholerae GN=sfcA PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.094e-19
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F+EE++K M +    +P +F +SNPT   E   +D  +      + A+GSPF+ V L  GK   + Q NN Y+FPGIGLG L + AR +TD ML +++  LAS         G L P ++SI  ++ ++  AV + A+E+ +A
Sbjct:  393 FSEEIIKEMHQH-CPRPIVFPLSNPTSRVEALPSDIIRWTNGEALVATGSPFDPV-LHEGKTYPIVQCNNSYIFPGIGLGVLAANARRVTDEMLMESSRALASCSPLAINGHGPLLPPLESIHSVSKKIAFAVAKKAIEQGVA 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_VIBC3 (NAD-dependent malic enzyme OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sfcA PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.094e-19
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F+EE++K M +    +P +F +SNPT   E   +D  +      + A+GSPF+ V L  GK   + Q NN Y+FPGIGLG L + AR +TD ML +++  LAS         G L P ++SI  ++ ++  AV + A+E+ +A
Sbjct:  393 FSEEIIKEMHQH-CPRPIVFPLSNPTSRVEALPSDIIRWTNGEALVATGSPFDPV-LHEGKTYPIVQCNNSYIFPGIGLGVLAANARRVTDEMLMESSRALASCSPLAINGHGPLLPPLESIHSVSKKIAFAVAKKAIEQGVA 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.429e-19
Identity = 52/143 (36.36%), Postives = 82/143 (57.34%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F EE++K M  S   +PAI  MSNPT  +E    D  +      +  +GSPF  V+  NG   H+ QANN  +FPG+GLGT+++ ++ ITDGM +  A  +A  M +  +P   + P ++ +R ++A V   V + A++E +A
Sbjct:  401 FTEEIVKEMA-SHVKRPAILPMSNPTTLSEAKPEDLIEWTEGRALITTGSPFPPVEY-NGVTYHIGQANNALVFPGLGLGTIVTKSKLITDGMFEACARAIAG-MVNVGVPGAPMLPKVEDLRTVSATVAVEVAKTAMKEGVA 540          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHESW (NAD-dependent malic enzyme OS=Shewanella sp. (strain W3-18-1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.429e-19
Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDL 476
            F EE+++AM  S   +P IF MSNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + AVE+ L
Sbjct:  393 FTEEIIRAMH-SHCARPIIFPMSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGTGPLLPKLEDIHAVSKHIAFAVGKVAVEQGL 532          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHESR (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.429e-19
Identity = 56/158 (35.44%), Postives = 82/158 (51.90%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            VKP            F EE+++AM  S   +P IF +SNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + A+E+ L+
Sbjct:  378 VKPTVLIGVSGAPGLFTEEIVRAMH-SHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.429e-19
Identity = 56/158 (35.44%), Postives = 82/158 (51.90%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            VKP            F EE+++AM  S   +P IF +SNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + A+E+ L+
Sbjct:  378 VKPTVLIGVSGAPGLFTEEIVRAMH-SHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPC (NAD-dependent malic enzyme OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sfcA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.429e-19
Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDL 476
            F EE+++AM  S   +P IF MSNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + AVE+ L
Sbjct:  393 FTEEIIRAMH-SHCARPIIFPMSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGTGPLLPKLEDIHAVSKHIAFAVGKVAVEQGL 532          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB9 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS195) GN=sfcA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.438e-19
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDL 476
            F EE+++AM  S   +P IF +SNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + AVE+ L
Sbjct:  393 FTEEIIRAMH-SHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGL 532          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.438e-19
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDL 476
            F EE+++AM  S   +P IF +SNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + AVE+ L
Sbjct:  393 FTEEIIRAMH-SHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETFEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGL 532          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB5 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sfcA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.438e-19
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDL 476
            F EE+++AM  S   +P IF +SNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + AVE+ L
Sbjct:  393 FTEEIIRAMH-SHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGL 532          
The following BLAST results are available for this feature:
BLAST of CF503813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_VIBCH1.094e-1937.06NAD-dependent malic enzyme OS=Vibrio cholerae GN=s... [more]
MAO1_VIBC31.094e-1937.06NAD-dependent malic enzyme OS=Vibrio cholerae sero... [more]
MAO3_BACSU1.429e-1936.36Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAO1_SHESW1.429e-1938.73NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESR1.429e-1935.44NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHESM1.429e-1935.44NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEPC1.429e-1938.73NAD-dependent malic enzyme OS=Shewanella putrefaci... [more]
MAO1_SHEB92.438e-1938.03NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB82.438e-1938.03NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB52.438e-1938.03NAD-dependent malic enzyme OS=Shewanella baltica (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-299 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503813 ID=CF503813; Name=CF503813; organism=Citrus sinensis; type=EST; length=501bp
GAAAGGTCAAACCCCATGTGCTTCTTGGTTTGTCTGGCGTAGGTGGTGTC
TTCAATGAAGAGGTGCTTAAGGCTATGCGAGAGTCTGATTCTGTCAAACC
TGCCATTTTTGCTATGTCAAATCCGACCATGAATGCTGAATGCACTGCTG
CTGATGCTTTTAAGCATGCTGGGGAAAATATAGTGTTTGCTAGTGGAAGT
CCTTTTGAGAATGTTGATCTGGGAAATGGGAAAATAGGCCATGTAAATCA
AGCAAATAACATGTATCTGTTCCCTGGGATTGGTTTGGGAACTCTCCTTT
CAGGTGCTCGTTTTATAACAGATGGAATGTTACAACAAGCTGCAGAATGC
CTTGCGTCCTATATGACCGATGAGGAAATTCCAAAAGGCATTCTGTATCC
ATCTATTGACAGTATTCGAGATATTACGGCAGAAGTTGGAGCAGCTGTTC
TACGAGCAGCAGTTGAGGAAGACTTGGCAGAAGGTCATGGTGAAGTTGGT
C
back to top