CF503813

Overview
NameCF503813
Unique NameCF503813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5211 contig Csv1_Contig5211:47..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            VKP            F EE+++ M +    +P +  +SNPT   E T  D       N + A+GSPF  V +   KI  + Q NN ++FPGIGLG + SGA  ITD ML  A+E LA Y       +G++ P +  I+ ++  +  AV + A ++ +A
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKH-CPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPV-VWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVA 536          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_ECOHS (NAD-dependent malic enzyme OS=Escherichia coli O9:H4 (strain HS) GN=sfcA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            VKP            F EE+++ M +    +P +  +SNPT   E T  D       N + A+GSPF  V +   KI  + Q NN ++FPGIGLG + SGA  ITD ML  A+E LA Y       +G++ P +  I+ ++  +  AV + A ++ +A
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKH-CPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPV-VWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVA 536          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_ECODH (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / DH10B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            VKP            F EE+++ M +    +P +  +SNPT   E T  D       N + A+GSPF  V +   KI  + Q NN ++FPGIGLG + SGA  ITD ML  A+E LA Y       +G++ P +  I+ ++  +  AV + A ++ +A
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKH-CPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPV-VWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVA 536          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_ECOBW (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / BW2952) GN=sfcA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.024e-17
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            VKP            F EE+++ M +    +P +  +SNPT   E T  D       N + A+GSPF  V +   KI  + Q NN ++FPGIGLG + SGA  ITD ML  A+E LA Y       +G++ P +  I+ ++  +  AV + A ++ +A
Sbjct:  381 VKPDILIGVSGQTGLFTEEIIREMHKH-CPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPV-VWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVA 536          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.747e-17
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F +EV++AM  S    P IF +SNPT   E   AD    +    + A+GSP   V+        + QANN+  FPGIGLG +++GAR IT  ML  AA+ +A +  +   P   L P + ++R I+  V  AV RAAV++ +A
Sbjct:  388 FTKEVVEAMTASCK-HPMIFPLSNPTSRMEAIPADVLAWSNGRALLATGSPVAPVEFDETTYV-IGQANNVLAFPGIGLGVIVAGARLITRRMLHAAAKAIA-HQANPTNPGDSLLPDVQNLRAISTTVAEAVYRAAVQDGVA 527          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.747e-17
Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEE 470
            F EE+++AM  S   +P +F +SNPT   E T  D         + A+GSPFE V + +     + Q NN Y+FPGIGLG L  GA  +++ ML  ++  LA      +   G L P ++ I D++  +  AV + A+E+
Sbjct:  393 FTEEIIRAMH-SHCARPIVFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDDVTYD-IAQCNNSYIFPGIGLGVLACGANRVSNEMLMASSRALAECSPLAKDGSGPLLPPLEEIHDVSKHIAFAVAKVAIEQ 530          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.747e-17
Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F+EEV++ +  S   +P +  +SNPT   E T  +         + A+GSPF+ V +G+ +I  + Q NN Y+FPGIGLG + + A  +T+GML  AA  LA+        +G + P++  IR+++  +  AV + A  E  A
Sbjct:  395 FSEEVIRELH-SHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIP-IAQCNNAYIFPGIGLGVIAARANRVTEGMLMAAANALANCSPIVTQGEGAVLPALGDIREVSKRIAVAVAKQAQAEGKA 535          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.747e-17
Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F+EEV++ +  S   +P +  +SNPT   E T  +         + A+GSPF+ V +G+ +I  + Q NN Y+FPGIGLG + + A  +T+GML  AA  LA+        +G + P++  IR+++  +  AV + A  E  A
Sbjct:  395 FSEEVIRELH-SHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIP-IAQCNNAYIFPGIGLGVIAARANRVTEGMLMAAANALANCSPIVTRGEGAVLPALGDIREVSKRIAVAVAKQAQAEGKA 535          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.747e-17
Identity = 51/143 (35.66%), Postives = 79/143 (55.24%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F++EV+  M  +   +P +  +SNPT   E T +D  +    + + A+GSPF+ V + N K   + Q NN Y+FPGIGLG L SGA  +TD ML +++  LA      +   G L P +  I  ++  +  AV + AVE++ A
Sbjct:  389 FSQEVIMEMH-AHCKRPIVLPLSNPTSRVEATPSDIIRWTEGDALIATGSPFDPV-IFNEKTYPIAQCNNSYIFPGIGLGVLASGATRVTDEMLMESSRVLAECSPLAQNGNGALLPPLKDIHQVSHCIALAVAKKAVEQNKA 529          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.282e-17
Identity = 51/138 (36.96%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAV 464
            F EEV+K M +    +P IF +SNPT   E T AD  +      + A+GSPF  V+   GK   + Q NN ++FPGIGLG + SGA  +TD ML  A+  LA      +  +G L P +  I  ++  +   V + A+
Sbjct:  395 FTEEVVKTMHKH-CTRPIIFPLSNPTSRVEATPADLIRWTDGQALVATGSPFAPVEY-KGKRYVIAQCNNSFIFPGIGLGVIASGATRVTDAMLMSASRALAECSPLVKGAEGSLLPDLADIHQVSRYIAKMVAKTAM 530          
The following BLAST results are available for this feature:
BLAST of CF503813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECOLC1.024e-1734.18NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOHS1.024e-1734.18NAD-dependent malic enzyme OS=Escherichia coli O9:... [more]
MAO1_ECODH1.024e-1734.18NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOBW1.024e-1734.18NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAOX_MYCTU1.747e-1738.46Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MAO1_SHEAM1.747e-1735.00NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO1_PSEAE1.747e-1734.27NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB1.747e-1734.27NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO12_PHOPR1.747e-1735.66NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]
MAO1_AERS42.282e-1736.96NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-299 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503813 ID=CF503813; Name=CF503813; organism=Citrus sinensis; type=EST; length=501bp
GAAAGGTCAAACCCCATGTGCTTCTTGGTTTGTCTGGCGTAGGTGGTGTC
TTCAATGAAGAGGTGCTTAAGGCTATGCGAGAGTCTGATTCTGTCAAACC
TGCCATTTTTGCTATGTCAAATCCGACCATGAATGCTGAATGCACTGCTG
CTGATGCTTTTAAGCATGCTGGGGAAAATATAGTGTTTGCTAGTGGAAGT
CCTTTTGAGAATGTTGATCTGGGAAATGGGAAAATAGGCCATGTAAATCA
AGCAAATAACATGTATCTGTTCCCTGGGATTGGTTTGGGAACTCTCCTTT
CAGGTGCTCGTTTTATAACAGATGGAATGTTACAACAAGCTGCAGAATGC
CTTGCGTCCTATATGACCGATGAGGAAATTCCAAAAGGCATTCTGTATCC
ATCTATTGACAGTATTCGAGATATTACGGCAGAAGTTGGAGCAGCTGTTC
TACGAGCAGCAGTTGAGGAAGACTTGGCAGAAGGTCATGGTGAAGTTGGT
C
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