CF503817

Overview
NameCF503817
Unique NameCF503817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length407
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7217 contig Csv1_Contig7217:536..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_STAAS (Aconitate hydratase OS=Staphylococcus aureus (strain MSSA476) GN=acnA PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.470e-48
Identity = 91/135 (67.41%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+V  +VKTSLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L   +  AI D D++  +VLSGNRNFEGR+HPL +ANYLASP LVVAYALAGTVDID   EPIG   DG+ VY KDIWP+
Sbjct:  464 EKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYGCTTCIGNSGPLLPEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKGNDGEDVYLKDIWPS 598          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_STAAN (Aconitate hydratase OS=Staphylococcus aureus (strain N315) GN=acnA PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.470e-48
Identity = 91/135 (67.41%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+V  +VKTSLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L   +  AI D D++  +VLSGNRNFEGR+HPL +ANYLASP LVVAYALAGTVDID   EPIG   DG+ VY KDIWP+
Sbjct:  464 EKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYGCTTCIGNSGPLLPEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKGNDGEDVYLKDIWPS 598          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_STAAM (Aconitate hydratase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=acnA PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.470e-48
Identity = 91/135 (67.41%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+V  +VKTSLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L   +  AI D D++  +VLSGNRNFEGR+HPL +ANYLASP LVVAYALAGTVDID   EPIG   DG+ VY KDIWP+
Sbjct:  464 EKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYGCTTCIGNSGPLLPEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKGNDGEDVYLKDIWPS 598          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_STAAC (Aconitate hydratase OS=Staphylococcus aureus (strain COL) GN=acnA PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.470e-48
Identity = 91/135 (67.41%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+V  +VKTSLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L   +  AI D D++  +VLSGNRNFEGR+HPL +ANYLASP LVVAYALAGTVDID   EPIG   DG+ VY KDIWP+
Sbjct:  464 EKGLKVPEYVKTSLAPGSKVVTGYLRDAGLQPYLDDLGFNLVGYGCTTCIGNSGPLLPEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGTVDIDLQNEPIGKGNDGEDVYLKDIWPS 598          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_BRAJA (Aconitate hydratase OS=Bradyrhizobium japonicum GN=acnA PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 5.919e-48
Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 1
Query:    7 GLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            GL+ KPWVKTSLAPGS VV  YL  SGLQ +L++ GF++VG+GCTTCIGNSG L E ++ +I DN IVAAAVLSGNRNFEGRV P  +ANYLASPPLVVA+ALAG+V  +   EP+G  KDGK VY KDIWPT
Sbjct:  466 GLKAKPWVKTSLAPGSQVVAAYLADSGLQAHLDKVGFNLVGFGCTTCIGNSGPLPEEISKSINDNGIVAAAVLSGNRNFEGRVSPDVQANYLASPPLVVAHALAGSVTKNLAVEPLGEGKDGKPVYLKDIWPT 598          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_STAAR (Aconitate hydratase OS=Staphylococcus aureus (strain MRSA252) GN=acnA PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.722e-47
Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+V  +VKTSLAPGS VVT YL  +GLQ YL++ GF++VGYGCTTCIGNSG L   +  AI D D++  +VLSGNRNFEGR+HPL +ANYLASP LVVAYALAG+VDID   EPIG   DG+ VY KDIWP+
Sbjct:  464 EKGLKVPEYVKTSLAPGSKVVTGYLRGAGLQPYLDDLGFNLVGYGCTTCIGNSGPLLPEIEKAIADEDLLVTSVLSGNRNFEGRIHPLVKANYLASPQLVVAYALAGSVDIDLQNEPIGKGNDGEDVYLKDIWPS 598          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_RICBR (Aconitate hydratase OS=Rickettsia bellii (strain RML369-C) GN=acnA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 6.545e-47
Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+VKPWVKTSLAPGS VVT+YL  SGL +YL++ GF++VGYGCTTCIGNSG L+  +   I  N +V A+VLSGNRNFEGR++PLT+A+YLASP LVVAYAL+G+++ID    P+G    G+ VY KDIWP+
Sbjct:  446 EQGLKVKPWVKTSLAPGSKVVTEYLKSSGLNQYLDQLGFNLVGYGCTTCIGNSGPLNPEIEETINKNGLVVASVLSGNRNFEGRINPLTKASYLASPILVVAYALSGSLNIDLTNHPLGKNDKGRDVYLKDIWPS 580          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_DEIRA (Aconitate hydratase OS=Deinococcus radiodurans GN=acn PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.487e-46
Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+ KPWVKTSLAPGS VVT+YL  +GLQ+YL++ GF+ VGYGC TCIGNSG L E V  AI + D+V A+VLSGNRNFEGRV+P  +ANYLASPPLVVAYALAGTV  D   + IG   +G+ V+ KDIWPT
Sbjct:  462 EKGLKTKPWVKTSLAPGSRVVTEYLETAGLQQYLDQIGFNTVGYGCMTCIGNSGPLPEPVVEAIQEGDLVVASVLSGNRNFEGRVNPHIKANYLASPPLVVAYALAGTVVNDIVNDAIGQDSNGQDVFLKDIWPT 596          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: ACON_RICFE (Aconitate hydratase OS=Rickettsia felis GN=acnA PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 3.248e-46
Identity = 88/135 (65.19%), Postives = 109/135 (80.74%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+VKPWVKTSLAPGS VVT+YL  SGL KYL+E GF++VGYGCTTCIGNSG L+  +   I  N +V A+VLSGNRNFEGR++PLT+A+YL SP LVVAYAL+GT++ID + +PI     GK++Y KDIWP+
Sbjct:  447 EHGLKVKPWVKTSLAPGSKVVTEYLKLSGLDKYLDELGFNLVGYGCTTCIGNSGPLNPEIEETINKNGLVVASVLSGNRNFEGRINPLTKASYLGSPILVVAYALSGTLNIDLNNQPI-----GKNIYLKDIWPS 576          
BLAST of CF503817 vs. ExPASy Swiss-Prot
Match: IREB2_CHICK (Iron-responsive element-binding protein 2 OS=Gallus gallus GN=IREB2 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.234e-45
Identity = 82/135 (60.74%), Postives = 108/135 (80.00%), Query Frame = 1
Query:    1 ELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGYGCTTCIGNSGDLDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFDKEPIGTTKDGKSVYFKDIWPT 405
            E GL+VKP+++TSL+PGSG+VT YL  SG+  YL++ GF +VGYGC+TC+GN+  L E++ +AI   DI+A  VLSG +NFEGR+    RANYLASPPLVVAYA+AGTV IDF+ EP+GT  +G+S+Y +DIWPT
Sbjct:  535 EAGLEVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEVVGYGCSTCVGNTAPLPEAIRNAIKQGDIIACGVLSGTKNFEGRLCDCVRANYLASPPLVVAYAIAGTVRIDFETEPLGTGFNGRSIYLRDIWPT 669          
The following BLAST results are available for this feature:
BLAST of CF503817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACON_STAAS3.470e-4867.41Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAN3.470e-4867.41Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAM3.470e-4867.41Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_STAAC3.470e-4867.41Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_BRAJA5.919e-4869.17Aconitate hydratase OS=Bradyrhizobium japonicum GN... [more]
ACON_STAAR1.722e-4766.67Aconitate hydratase OS=Staphylococcus aureus (stra... [more]
ACON_RICBR6.545e-4763.70Aconitate hydratase OS=Rickettsia bellii (strain R... [more]
ACON_DEIRA2.487e-4666.67Aconitate hydratase OS=Deinococcus radiodurans GN=... [more]
ACON_RICFE3.248e-4665.19Aconitate hydratase OS=Rickettsia felis GN=acnA PE... [more]
IREB2_CHICK1.234e-4560.74Iron-responsive element-binding protein 2 OS=Gallu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-304 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503817 ID=CF503817; Name=CF503817; organism=Citrus sinensis; type=EST; length=407bp
GAACTTGGTTTGCAGGTCAAGCCATGGGTTAAAACAAGTCTTGCCCCAGG
CTCAGGAGTTGTTACTAAATATTTACTCCAGAGTGGACTGCAAAAATATT
TAAATGAGCAAGGATTCCATATTGTTGGATATGGATGCACAACATGTATT
GGAAATTCAGGGGATCTGGATGAATCTGTTGCATCTGCTATTACTGACAA
TGACATTGTGGCAGCAGCTGTGCTTTCTGGAAACAGGAATTTTGAGGGTC
GTGTTCATCCCTTGACAAGAGCTAATTACCTTGCTTCTCCTCCTTTAGTT
GTGGCATATGCCCTTGCTGGCACGGTTGACATAGATTTTGATAAGGAGCC
GATTGGAACAACCAAGGATGGTAAGAGTGTTTATTTCAAGGATATCTGGC
CGACTAC
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